PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008541-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 363aa MW: 42210.9 Da PI: 8.4028

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008541-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.8	4.7e-19	27	119	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv+ + + ++ +p kf+e ++ +k s t+ +s ++W+++l+ + + +++v+++GWk+Fv++ng++++Df+vF+++g+s+f v+ AUR62008541-RA 27 FFKVM---YGDFELQMNIPQKFMECFK-EK-LSPWCTIIGPSKQKWKIRLSSTYNERQMVFSDGWKQFVRDNGVETNDFLVFRFVGDSSF--EVS 114 66666...333444699****5444.33.55588999********9999999*****************************9..999 PP EE-SS CS B3 96 vfrks 100 vf+ks AUR62008541-RA 115 VFDKS 119 99985 PP
2	B3	46.2	8.4e-15	243	329	1	86
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+ +++p +v + l++pk a++h++k+ + +l++ ++ sW+v +++ +++s ++ l++ W F +n+L+e D++vF+l++ AUR62008541-RA 243 FQITMLPTHVYRGFYLTIPKVWANKHMIKESHELELRVPGSTKGSWKVGCRWtKGGSIQCQLRSKWPVFLLENNLEEYDTCVFELIQ 329 788999******************99999999999999999****96666667***********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGKKCEGCKI AENYNYWSEL PATKHQFFKV MYGDFELQMN IPQKFMECFK EKLSPWCTII 60 GPSKQKWKIR LSSTYNERQM VFSDGWKQFV RDNGVETNDF LVFRFVGDSS FEVSVFDKSG 120 CEKEGCHFSI NSNSRSRRTS CTSTLHINNH GSVVKEEIEI FDSSSEDKSL WEEGEEESED 180 VSHVTEEKRE RRGSSSEGKL PQSQKYFISN RRDLKPGEKQ RASKMAESYR HNMKDNKRVL 240 PTFQITMLPT HVYRGFYLTI PKVWANKHMI KESHELELRV PGSTKGSWKV GCRWTKGGSI 300 QCQLRSKWPV FLLENNLEEY DTCVFELIQK GISDDVRPPI FNVHIFRTVD HIVPLTVSTR 360 MV*

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGKKCEGCKI AENYNYWSEL PATKHQFFKV MYGDFELQMN IPQKFMECFK EKLSPWCTII  60
GPSKQKWKIR LSSTYNERQM VFSDGWKQFV RDNGVETNDF LVFRFVGDSS FEVSVFDKSG  120
CEKEGCHFSI NSNSRSRRTS CTSTLHINNH GSVVKEEIEI FDSSSEDKSL WEEGEEESED  180
VSHVTEEKRE RRGSSSEGKL PQSQKYFISN RRDLKPGEKQ RASKMAESYR HNMKDNKRVL  240
PTFQITMLPT HVYRGFYLTI PKVWANKHMI KESHELELRV PGSTKGSWKV GCRWTKGGSI  300
QCQLRSKWPV FLLENNLEEY DTCVFELIQK GISDDVRPPI FNVHIFRTVD HIVPLTVSTR  360
MV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	4e-16	B3 family protein