PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008538-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 363aa MW: 41455.2 Da PI: 7.9288

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008538-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.2	3.1e-18	72	164	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv+ +k++ l++p+kf+ e+ ++k + tl +s ++W+++l+ ++ + ++++GW++Fv +ng++e Df+vF+++++s+f v+ AUR62008538-RA 72 FFKVM--LGDFKHQ-LRIPRKFM-ECFKVKLLP-WCTLIGPSKNKWKIRLSSTGDEMSLMFSDGWEQFVLDNGVEEADFLVFRFVKDSSF--EVS 159 67777..6667765.******.776666666.889*********99999999*************************99999..999 PP EE-SS CS B3 96 vfrks 100 vf+ks AUR62008538-RA 160 VFDKS 164 99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
HETDRTKKLD SAGTSPVGDR VEIRVREESC RSNCVPELVA EDWPVMEKKC EGCKMTENYK 60 YWSEFPATKH QFFKVMLGDF KHQLRIPRKF MECFKVKLLP WCTLIGPSKN KWKIRLSSTG 120 DEMSLMFSDG WEQFVLDNGV EEADFLVFRF VKDSSFEVSV FDKSGCEREG CHFTTNSNYS 180 SRRTSCTSTL HINYGSVAKE EIEICDSSSE DCSLLEEGEE ETKDVSHVME EEREGSSSEG 240 KLPQSQKYFI SNRRVLKPGE KKRASKMADC YSRGMKYNKT VFPVFQITML PTHVYRGFIF 300 DNPKELGKEA YDQGASRGGA ACSRFYKGKL ESRMQMDKRR IYTMPTQIKV AVICAGKQLG 360 GA*

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

HETDRTKKLD SAGTSPVGDR VEIRVREESC RSNCVPELVA EDWPVMEKKC EGCKMTENYK  60
YWSEFPATKH QFFKVMLGDF KHQLRIPRKF MECFKVKLLP WCTLIGPSKN KWKIRLSSTG  120
DEMSLMFSDG WEQFVLDNGV EEADFLVFRF VKDSSFEVSV FDKSGCEREG CHFTTNSNYS  180
SRRTSCTSTL HINYGSVAKE EIEICDSSSE DCSLLEEGEE ETKDVSHVME EEREGSSSEG  240
KLPQSQKYFI SNRRVLKPGE KKRASKMADC YSRGMKYNKT VFPVFQITML PTHVYRGFIF  300
DNPKELGKEA YDQGASRGGA ACSRFYKGKL ESRMQMDKRR IYTMPTQIKV AVICAGKQLG  360
GA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-18	B3 family protein