PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008538-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 363aa    MW: 41455.2 Da    PI: 7.9288
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008538-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.23.1e-18721641100
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv+     +k++ l++p+kf+ e+ ++k  +   tl  +s ++W+++l+ ++   + ++++GW++Fv +ng++e Df+vF+++++s+f   v+
  AUR62008538-RA  72 FFKVM--LGDFKHQ-LRIPRKFM-ECFKVKLLP-WCTLIGPSKNKWKIRLSSTGDEMSLMFSDGWEQFVLDNGVEEADFLVFRFVKDSSF--EVS 159
                     67777..6667765.********.776666666.889*************99999999***************************99999..999 PP

                     EE-SS CS
              B3  96 vfrks 100
                     vf+ks
  AUR62008538-RA 160 VFDKS 164
                     99985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
HETDRTKKLD SAGTSPVGDR VEIRVREESC RSNCVPELVA EDWPVMEKKC EGCKMTENYK  60
YWSEFPATKH QFFKVMLGDF KHQLRIPRKF MECFKVKLLP WCTLIGPSKN KWKIRLSSTG  120
DEMSLMFSDG WEQFVLDNGV EEADFLVFRF VKDSSFEVSV FDKSGCEREG CHFTTNSNYS  180
SRRTSCTSTL HINYGSVAKE EIEICDSSSE DCSLLEEGEE ETKDVSHVME EEREGSSSEG  240
KLPQSQKYFI SNRRVLKPGE KKRASKMADC YSRGMKYNKT VFPVFQITML PTHVYRGFIF  300
DNPKELGKEA YDQGASRGGA ACSRFYKGKL ESRMQMDKRR IYTMPTQIKV AVICAGKQLG  360
GA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-18B3 family protein