PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008205-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Dof
Protein Properties Length: 347aa    MW: 36869.7 Da    PI: 7.9407
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008205-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.51.6e-3967127262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     ++++lkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rkn+k+s
  AUR62008205-RA  67 HDQHLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNNKKS 127
                     6899*****************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MMAHSSLQVC MDSSDWLQGT MSEEISTGLD SSSSPSGGTT TTECMLAAAC SSRAGAPLME  60
RRLRPPHDQH LKCPRCDSTH TKFCYYNNYS LSQPRYFCKT CRRYWTKGGT LRNIPVGGGC  120
RKNNKKSSSK KSNNDNQNQP LNVHLHHGGG NSILGPNSSP NNPIDLHLSF PHEVQFPPHL  180
ANLIGAQMSL AGGGGFMEGG GLMRPIDFME SKYEGLVGGG NNRGHDFMGG NSNTNEQFGL  240
MGGFGGYNGN NTTTSFGGIY SSNSSPFGVS NTNDMQSSGI NVKPNPKLLS LDWQDQGCAT  300
TTTTSDHNGA KDSSFGYNMN SNGASLGSWT GLMGGGFQSP TTNSLV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.18e-42Dof family protein