PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62007715-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 100aa MW: 11416.9 Da PI: 7.6113 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 66.5 | 2.6e-21 | 9 | 42 | 1 | 34 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-E CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdae 34 krien snrqvt+skRr+gi+KKAeE+SvLCda+ AUR62007715-RA 9 KRIENPSNRQVTYSKRRHGIFKKAEEISVLCDAK 42 79******************************96 PP | |||||||
2 | K-box | 63.6 | 7.3e-22 | 40 | 95 | 13 | 68 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRsk 68 +a++l++e++++kke++n+q e+Rhl+Ged+ L + eLqqLe++Le++++++R+k AUR62007715-RA 40 DAKNLSNEIERIKKENDNMQIELRHLKGEDIAALPYTELQQLEDALEHGISSVRDK 95 3589**************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MGRGKIEIKR IENPSNRQVT YSKRRHGIFK KAEEISVLCD AKNLSNEIER IKKENDNMQI 60 ELRHLKGEDI AALPYTELQQ LEDALEHGIS SVRDKEASN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 4e-36 | MIKC_MADS family protein |