PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62007577-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 206aa MW: 23806.8 Da PI: 6.5178 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.4 | 1.4e-07 | 9 | 51 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WTt +l+ +a +++ ++ +W ++a+ +g ++++++k ++ AUR62007577-RA 9 SWTTKQNKLFEKALALYDKDtqdRWQKVANVVG--KSPEEVKRHY 51 7*******************************8..9********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MASCSSNSSW TTKQNKLFEK ALALYDKDTQ DRWQKVANVV GKSPEEVKRH YEILVEDVKS 60 IEQGQVPYPY RLAERFEKQE KEKKISYFKE RKSFFNGEGS NINSNNSNNE GKMIVVTPEQ 120 AALAKKVCFK CQGMGHIARD CGNKVTVSKK EHRMLLAYLD QEEKEKESTC LLNTEEEFDF 180 EEFEGQEKIT PEPEHHHIGY MLKLQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 2e-26 | MYB_related family protein |