PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007327-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 515aa    MW: 56762.1 Da    PI: 4.5229
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007327-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.56.6e-36371282102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y++++d+++++++sws++ nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++
  AUR62007327-RA  37 FLCKTYDMVDDPATDSVVSWSSTHNSFIVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKN 122
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+k 
  AUR62007327-RA 123 ITRRKP 128
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    
MDSSSTTATT TPAAAETTTT GGNTPTPMSN VNGPPPFLCK TYDMVDDPAT DSVVSWSSTH  60
NSFIVWNPPE FARDLLPKYF KHNNFSSFVR QLNTYGFRKV DPDRWEFANE GFLRGQKHLL  120
KNITRRKPAH GQGPQHQQQA NGQTSSVGAC VEVGKFGLEE EVERLKRDKN VLMQELVRLR  180
QQQQSTDNQL QTMVQRLQGM EQRQQQMMSF LAKAVKSPGF LAQFVQQQTE SSRRISEANK  240
KRRLKQDGVT ESENSTPPDG QIVKYQPLGN DSTQAMLRQL RNLDANYNSN SDNFYIGDSS  300
STSAMENKTA ANRVSGVTLQ EVPPTSVPAY VIPTSQIGAG GPDGAVVSMI KSSPVMTSSE  360
TVSTPALSEI SGLLSPETIP SVSLPPTNSV MPEMSSLPDI VHNSVDIPGG NFLLNETGDG  420
DFMDLASVDF DGTIPIELPP DADLDLFLDE DSWDQFINRN NLIPSDNNEP EMPNVENSAE  480
VKEVQPLDNG WDKRQRMDQL TERMGLLNSD NQLL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239246NKKRRLKQ
2240245KKRRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-125HSF family protein