PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007236-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARR-B
Protein Properties Length: 570aa    MW: 63936.7 Da    PI: 6.3026
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007236-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.31.5e-27315368256
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      +++Wtp+LH++Fv+aveqL G ++A+P++ilelmkv+gLt+++++SHLQkYR++
  AUR62007236-RA 315 IKVDWTPDLHKKFVQAVEQL-GVDQAIPSRILELMKVDGLTRHNIASHLQKYRMH 368
                     5899****************.********************************96 PP
2Myb_DNA-binding41.92.3e-13317366248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT+++++++v+av+qlG +   +++I + m   g+t+ ++ s++qky+
   AUR62007236-RA 317 VDWTPDLHKKFVQAVEQLGVDqaIPSRILELMKvDGLTRHNIASHLQKYR 366
                      57***********************************************7 PP
3Response_reg27.91.2e-10201261109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+ d++ + +  +++ le+ ++ +v ++++ +eal  +   ++ +++ ++ +++ + dG   +  +++++ +lp i+++ ++  +++ +++ +G
  AUR62007236-RA  20 ILLLDEDTNSAAEIKSKLEEMEF-IVIAFSSEHEALSAIsgITESFHVAIVEVSIHNRDGR--CNFLEAAK-DLPTIMISNEQCLNTMMKCIALG 110
                     789999999999***********.***************444555***************6..77777766.9********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a +fl Kp ++e+l++
  AUR62007236-RA 111 AVEFLIKPLSEEKLRN 126
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    
MVCTANDLLE WKDFPKGLRI LLLDEDTNSA AEIKSKLEEM EFIVIAFSSE HEALSAISGI  60
TESFHVAIVE VSIHNRDGRC NFLEAAKDLP TIMISNEQCL NTMMKCIALG AVEFLIKPLS  120
EEKLRNLWQH VVHKAFNTSE RAKSESLKSV KEFVGSVLEN QQQSIATQTQ VAEEPIIDTE  180
MDQNDHDQSA AGDKFPAPST PQIKQGGRSV DDGDSQDQMA NNSPVKEGGE FDGENKSVDN  240
TNNGNSFATM EVDPPQPTSV ASIKEEDRSD GSRESDKSIP KSHENEDTTY VGPDSGNLNK  300
DSKNTRGTKG SRKKIKVDWT PDLHKKFVQA VEQLGVDQAI PSRILELMKV DGLTRHNIAS  360
HLQKYRMHRR HILPKQEERR WPHPRDSIQR NYYPHRPVMA YPPYHTNHNF ASGQVYPIWG  420
QQGCQPPSYP MWGPPSYHWQ PAENWPWKPP YPAMHADAWG CPVYQPPPCP SSAFPQVSFI  480
AYYNHYYVIK QAQGTYGFHS SPHESYGKNC SDINPKDEVI DKVVKEAISK PWLPLPIGLK  540
PPSTDSVLAE LSRQGISIIP PHINGHHPC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-134ARR-B family protein