PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007223-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 279aa    MW: 31245.4 Da    PI: 9.3123
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007223-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81.1e-07223264443
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                      W+  Ed  l++a k ++++   +W++Ia+ ++ g+t   c  r
   AUR62007223-RA 223 WSSTEDIALLNALKAFPKDvamRWEKIAAAVP-GKTKAACMKR 264
                      ********************************.*******887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEFIDDYDES RPRLIFQSRS QPSSAAIDSP LNSQKNKPLL IISLSFSLIF LVGQGRIVDF  60
PPETEAIEAE ESKKKLPNRR NRGKRSDFDG VIPNGSSDFV KNSENLVDLK EKDRGFSKLG  120
EHVDGVVIEE REWSEEDSGL LRKQILKHPV GKPRRWEVIA EAFKGRHSVE SVVSKAKSLG  180
KEKPVDSDSY SKFLKDRKAV DKRVEDENVA VDKEESGGEV ITWSSTEDIA LLNALKAFPK  240
DVAMRWEKIA AAVPGKTKAA CMKRVSELKK EFRNSKAS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.13e-58MYB_related family protein