PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62007085-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 242aa MW: 26847.6 Da PI: 6.3621 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 99.2 | 2.5e-31 | 42 | 130 | 1 | 85 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+kv tpsdv+k++rlv+pk++ae++ ++++e++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ AUR62007085-RA 42 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSNNEKGLLLNFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 130 89****************************77788999************************************************953 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 242 aa Download sequence |
MSSSSSTNNN LSGAATTTTK IEVVDEEEGN KSVVVIEREH MFDKVVTPSD VGKLNRLVIP 60 KQHAEKYFPL DSSNNEKGLL LNFEDRTGKP WRFRYSYWNS SQSYVMTKGW SRFVKEKKLD 120 AGDIVSFQRG VGEIGGSVMQ VQREEGGVEP MVYESVPVVQ GKAAAKRLRL FGVNMDCPIS 180 HQTHDFDILG CSFLLLFVAA RVLAAAFGMS AGAETTNFLY QFTVSDPIIR LHDVFLMSCI 240 E* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46870.1 | 1e-62 | B3 family protein |