PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62006874-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 295aa MW: 33413.8 Da PI: 9.62 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49 | 1.1e-15 | 5 | 65 | 32 | 93 |
--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 32 esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 +++++l+++ g +Wev+l +r ++ ++++GWkeF+ka++ ke+D ++Fk++++s+f+ + AUR62006874-RA 5 LPQMVVLKSPGGSTWEVQL-VRDDNNTLFFKDGWKEFAKAHNFKENDLLMFKYTRDSCFKVW 65 5779***************.56666679***************************9***554 PP | |||||||
2 | B3 | 38.7 | 1.8e-12 | 182 | 270 | 1 | 92 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+ vl+ +v++ rl +p + +++ k+++++l+ +g++W v+++ + + g+ v+ +GW+ F+ +n L+e D+++Fkl++++++ AUR62006874-RA 182 FIVVLKDCNVSQYYRLGVPAPWSRSYLTRKHQDMELR---ANGKKWIVRFNAEPRYGGGVFISGWSTFAVDNLLQESDVCLFKLVSQKDEPV 270 566777778888999***********76666765555...69********8877777777778********************998665543 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MWNELPQMVV LKSPGGSTWE VQLVRDDNNT LFFKDGWKEF AKAHNFKEND LLMFKYTRDS 60 CFKVWMLSGR NLCEIAGSYF VKKSALGKND AGENSKLKRK NTAEGSAKAT GNKDNSELED 120 LDTERASRRK NRRNSTGCGL RNSGAEEKNR STDDTLDRVP PSEADKERAL QMANRDLTVK 180 SFIVVLKDCN VSQYYRLGVP APWSRSYLTR KHQDMELRAN GKKWIVRFNA EPRYGGGVFI 240 SGWSTFAVDN LLQESDVCLF KLVSQKDEPV IFDVSIYRAV PEAAHLPSHK TPKV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 3e-40 | B3 family protein |