PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006873-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 336aa    MW: 39145.5 Da    PI: 8.369
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006873-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.51.7e-11381171698
                     EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  16 lvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     + +p  f e+ +gk   + ++ l+ +s    +Wev+l  + ++++  + ++G +eFv+a gL+e+D++vFk++++s f  +v++f+
  AUR62006873-RA  38 IEIPLYFSENVKGK--LPHKVALKGPSVniDTWEVQL--KTHDDTtWIVGEGLEEFVSAFGLEENDTLVFKYKNNSYF--KVRIFN 117
                     77999999777777..777899999988889******..666666467789*********************998999..999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MLGRDDGSDA RTREEIMYWK SLNPFFKIHL RPNFRYGIEI PLYFSENVKG KLPHKVALKG  60
PSVNIDTWEV QLKTHDDTTW IVGEGLEEFV SAFGLEENDT LVFKYKNNSY FKVRIFNEKT  120
SCEKESSHFV VKSVSQQSQQ SCSLLKDTCS LKQETIGEVE KISNNDQSSI SRGSREKRVL  180
FEDSESDDDK PLFLRCIIRN KDAVKPKCPT PLAFCRAVKR KTEPEVEYNS YPRNSCSRDQ  240
KEMEIQRARQ RAKELQMHRE NSFFVALSRS HVYGTMKLGI PKQWWNEVVK SQFDKCLKLR  300
VKGKDEYDPH LLAKPLEDNY EFIYLEVEII RAINS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-14B3 family protein