PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006576-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARR-B
Protein Properties Length: 284aa    MW: 31818.1 Da    PI: 5.124
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006576-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like635.6e-20210262252
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmk..vkgLtlehvkSHLQk 52 
                      r+rW+ eLH  Fv +ve+LGG +kA+Pk+ile+++   + Lt+e+v+SHLQk
  AUR62006576-RA 210 SRVRWNDELHLDFVGVVESLGGVDKAVPKKILEVLSerHNNLTREQVASHLQK 262
                     59*********************************833579***********9 PP
2Myb_DNA-binding24.85.2e-08211263147
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg...kgRtlkqcksrwqky 47 
                      r rW  e+++ +v +v+ lGg     +k+I + +    +++t++q+ s++qk 
   AUR62006576-RA 211 RVRWNDELHLDFVGVVESLGGVdkaVPKKILEVLSerhNNLTREQVASHLQKQ 263
                      78******************77*****************************95 PP
3Response_reg65.13.4e-22591631106
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+ + +  ++++l++ +y +v++  ++ eal+ll++++  +Dl+l+D++m ++dG++ll++  +++  +p+i+++++++e+ +++ + +G
  AUR62006576-RA  59 VLVVDDDITCLTTITKLLSRCQY-QVTSKNNPIEALNLLEKNEekFDLVLTDVRMEEIDGFKLLETGVKHD--IPVIMMSGYDDEAIVKKGVTYG 150
                     89*********************.***************777777********************998877..********************** PP

                     ESEEEESS--HHH CS
    Response_reg  94 akdflsKpfdpee 106
                     a  ++ Kp++ ++
  AUR62006576-RA 151 ACNYFLKPISLSD 163
                     ********99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MSNEGVEKDN NPLLVIPTPD FPVNMSNEEI VEKVVIENNN LANNSVVSPT VSNSKGLKVL  60
VVDDDITCLT TITKLLSRCQ YQVTSKNNPI EALNLLEKNE EKFDLVLTDV RMEEIDGFKL  120
LETGVKHDIP VIMMSGYDDE AIVKKGVTYG ACNYFLKPIS LSDVEVIWQH VFRYNLEKCT  180
RGNKFDNNEN ENQSNKTKTN VKEGKKLAGS RVRWNDELHL DFVGVVESLG GVDKAVPKKI  240
LEVLSERHNN LTREQVASHL QKQMDKSSIP KNATDSELRS SNI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.15e-49ARR-B family protein