PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62006556-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HSF | ||||||||
Protein Properties | Length: 265aa MW: 30591.5 Da PI: 7.9089 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 117.2 | 1e-36 | 16 | 107 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e++++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkkv ++ weF++++Fkkg+k+ll++ AUR62006556-RA 16 FLTKTYQLVDDPRTDHIVSWGEDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADR---------WEFANEYFKKGEKHLLCE 101 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k+ AUR62006556-RA 102 IHRRKT 107 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MVFSVSESQK SVPAPFLTKT YQLVDDPRTD HIVSWGEDET TFVVWRPPEF ARDLLPNYFK 60 HNNFSSFVRQ LNTYGFKKVV ADRWEFANEY FKKGEKHLLC EIHRRKTPQH HHQIHYQDQV 120 LLPPQYLPSP PEEHGSWINI DQSSPLPSPK PSGGPNNDIL TALTEDNQRL RKRNFMLLSE 180 LNHMKTLYND IIYFIQNHVK PAVPNNGNDQ NRPPNYNAMA AAPPKLIELD DQDNQGDASK 240 RETIKLFGVP LQSKKRMHLA EGNL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 2e-91 | HSF family protein |