PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62006508-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | LBD | ||||||||
Protein Properties | Length: 122aa MW: 13258.8 Da PI: 4.3168 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 57 | 5.8e-18 | 2 | 55 | 48 | 101 |
DUF260 48 alpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 +lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q++ l+a+la++++e+ AUR62006508-RA 2 DLPESQRADAVSSMVYEANARLRDPVYGCAGAICQLQKQVNDLQAQLAKAQAEI 55 57999********************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MDLPESQRAD AVSSMVYEAN ARLRDPVYGC AGAICQLQKQ VNDLQAQLAK AQAEILNMKC 60 QQTNLLALLC MEMAHDHDES PPSNTSSQSV SPEHPNRGVS NNACFIDDNN LGGSLWEPLW 120 T* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 9e-33 | LBD family protein |