PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006415-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 879aa    MW: 96616.4 Da    PI: 7.1151
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006415-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.94.4e-19291391199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+kvl+ sd+++ grlvlpk +ae++   ++++e+  ++++d +g++W +++++  +++s++yvl+ G     ++ +L++gD+v+F++++  e++
  AUR62006415-RA 291 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPIKIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 383
                     99**************************555566778***************9989999999***9.********************876.7777 PP

                     .EEEEE-S CS
              B3  92 lvvkvfrk 99 
                     lv++++++
  AUR62006415-RA 384 LVMGFRKA 391
                     88877765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 879 aa     Download sequence    
MILYISSVAT DDIRAMLKSA FQRQIFCEEY HADDSGWREC VTCGKRLHCG CIASLSLIEL  60
LDCGGVRCIS CARNSGPSLT LNSGKCEGSG PCNMTENNAG LKQFGNYKEI NGSNQLSMMQ  120
NPNSNLAFGL LKQEEVLLSP AQTGSTWISN FTQSPMGIFQ KARPDISTNS MQAKDNYGAV  180
AHPNLNITLG VPTGTLQATS STIVDEREQR KMSDTFHQGF APQNLLPTPP KVAFSPASDT  240
NSSVIPQIRV ARPPVEGRGR HQLLPRYWPR ITDQELQQIT GDSNCTIVPL FEKVLSASDA  300
GRIGRLVLPK ACAEAYFPPI SQPEGLPIKI QDVKGKEWLF QFRFWPNNNS RMYVLEGVTP  360
CIQSMQLQAG DTVTFSRMDP EGKLVMGFRK ASNSASVQDA ASPAIRNASL SSESFFSGVI  420
ENLPVMSGCS GLLQSMKGST DTHINALPRQ LDSAGGNVPW HSSCNERTED GMLSTSMMML  480
ERKKSRNIGS KSKRLLIDNQ DVLALRLTWE EVQGMLRPPQ CARPTIVVIE DYEIEEYEEP  540
PVFGKSSIFT ARASGVVEQW AQCDNCSKWW RLPGDILLPP KWTCADNAWD QSRCFCSAPE  600
ELGPRELENF RHLNKDSTKR RMVMGSRMAQ EQESSGLNAL ATAAVLGDNT NDPGTSSVAA  660
TTKHPRHRPG CSCIVCIQPP SGKGKHKSTC TCTVCMTVKR RFKTLMMRKK KRQSEQEAEI  720
ALKNHQQQNP SKDMKADAEK NKPYPESQHE TEDDLQVGPA QTNDGQGQNP ISLLTESGKS  780
LDLNFHPQRD EDLKMKPSQS SLTNLLQLAS FPLEAYMKQS GLASLTAEQQ ASSTSFTGQA  840
VGEIGGKVVD DHPLSPPEQV NLSNGKCEPE NKQQCDHL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1699710KRRFKTLMMRKK
2699712KRRFKTLMMRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.10.0B3 family protein