PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62006415-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 879aa MW: 96616.4 Da PI: 7.1151 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.9 | 4.4e-19 | 291 | 391 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ AUR62006415-RA 291 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPIKIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 383 99**************************555566778***************9989999999***9.********************876.7777 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ AUR62006415-RA 384 LVMGFRKA 391 88877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 879 aa Download sequence |
MILYISSVAT DDIRAMLKSA FQRQIFCEEY HADDSGWREC VTCGKRLHCG CIASLSLIEL 60 LDCGGVRCIS CARNSGPSLT LNSGKCEGSG PCNMTENNAG LKQFGNYKEI NGSNQLSMMQ 120 NPNSNLAFGL LKQEEVLLSP AQTGSTWISN FTQSPMGIFQ KARPDISTNS MQAKDNYGAV 180 AHPNLNITLG VPTGTLQATS STIVDEREQR KMSDTFHQGF APQNLLPTPP KVAFSPASDT 240 NSSVIPQIRV ARPPVEGRGR HQLLPRYWPR ITDQELQQIT GDSNCTIVPL FEKVLSASDA 300 GRIGRLVLPK ACAEAYFPPI SQPEGLPIKI QDVKGKEWLF QFRFWPNNNS RMYVLEGVTP 360 CIQSMQLQAG DTVTFSRMDP EGKLVMGFRK ASNSASVQDA ASPAIRNASL SSESFFSGVI 420 ENLPVMSGCS GLLQSMKGST DTHINALPRQ LDSAGGNVPW HSSCNERTED GMLSTSMMML 480 ERKKSRNIGS KSKRLLIDNQ DVLALRLTWE EVQGMLRPPQ CARPTIVVIE DYEIEEYEEP 540 PVFGKSSIFT ARASGVVEQW AQCDNCSKWW RLPGDILLPP KWTCADNAWD QSRCFCSAPE 600 ELGPRELENF RHLNKDSTKR RMVMGSRMAQ EQESSGLNAL ATAAVLGDNT NDPGTSSVAA 660 TTKHPRHRPG CSCIVCIQPP SGKGKHKSTC TCTVCMTVKR RFKTLMMRKK KRQSEQEAEI 720 ALKNHQQQNP SKDMKADAEK NKPYPESQHE TEDDLQVGPA QTNDGQGQNP ISLLTESGKS 780 LDLNFHPQRD EDLKMKPSQS SLTNLLQLAS FPLEAYMKQS GLASLTAEQQ ASSTSFTGQA 840 VGEIGGKVVD DHPLSPPEQV NLSNGKCEPE NKQQCDHL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 699 | 710 | KRRFKTLMMRKK |
2 | 699 | 712 | KRRFKTLMMRKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 0.0 | B3 family protein |