PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62006407-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 373aa MW: 40436.3 Da PI: 4.4218

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62006407-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.9	2.6e-46	11	137	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrF+Ptdeel ++yLk+kv gk l ++i+evd+y++ PwdLp +++k+++ +wyfF++r k+y++g ++nrat+ gyWk+tg+d++ + AUR62006407-RA 11 PPGFRFRPTDEELFMFYLKRKVLGKFLGP-QMISEVDVYRFAPWDLPamACIKTKDLNWYFFCPRVKRYPNGGKANRATEWGYWKSTGNDRTAMY 104 9**********************9888.88***********5448888888*********************************9 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ vg ktLvfy+g+apkge+t+Wvmhe+rl AUR62006407-RA 105 -ASRPVGKIKTLVFYRGKAPKGERTNWVMHEFRL 137 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEGLLGSKSC PPGFRFRPTD EELFMFYLKR KVLGKFLGPQ MISEVDVYRF APWDLPAMAC 60 IKTKDLNWYF FCPRVKRYPN GGKANRATEW GYWKSTGNDR TAMYASRPVG KIKTLVFYRG 120 KAPKGERTNW VMHEFRLDDK MLADKGVPQD SYVICKIFEK SGLGPKNGED YGARFVEEEW 180 DSDTDDTNVP ERESGLVLHD TGCGGVADSP DGSVLTSSVS APSASYPIGT LVADAAATNV 240 ASPSTIAASM GTPYITATSM GTPLNNATSA RIPNDDPVSV DAPNVVATSV GFASASPTAV 300 GFASDAVGMT EDEVDRLLKY FIEDAGDVGD IFNGLGDLAD TSGQNIDWGD LSDTSTHIPD 360 WCNHFIEMDD LI*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEGLLGSKSC PPGFRFRPTD EELFMFYLKR KVLGKFLGPQ MISEVDVYRF APWDLPAMAC  60
IKTKDLNWYF FCPRVKRYPN GGKANRATEW GYWKSTGNDR TAMYASRPVG KIKTLVFYRG  120
KAPKGERTNW VMHEFRLDDK MLADKGVPQD SYVICKIFEK SGLGPKNGED YGARFVEEEW  180
DSDTDDTNVP ERESGLVLHD TGCGGVADSP DGSVLTSSVS APSASYPIGT LVADAAATNV  240
ASPSTIAASM GTPYITATSM GTPLNNATSA RIPNDDPVSV DAPNVVATSV GFASASPTAV  300
GFASDAVGMT EDEVDRLLKY FIEDAGDVGD IFNGLGDLAD TSGQNIDWGD LSDTSTHIPD  360
WCNHFIEMDD LI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	1e-78	NAC family protein