PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62006120-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 158aa MW: 18588.2 Da PI: 5.7543 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.1 | 1.2e-16 | 37 | 128 | 3 | 98 |
EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 k + +++ +++ l++p k+++++ + ++ + +l +g++W+v+l k +g+++l+kGW+ Fvk Lk g f++F++d+ + e++v++ AUR62006120-RA 37 KLIVAPSTQSHN-LRIPEKYVRTYyE-EQLANDYAKLSVNDGKVWRVEL--FKEGGKVWLSKGWECFVKNYSLKYGYFLLFRYDE-VKYEYHVTI 126 555555666555.***********63.44555689999999********..9999***************************987.88889***9 PP E- CS B3 97 fr 98 f+ AUR62006120-RA 127 FD 128 98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MQVLEKGNKI KGKKIALTTI PETTPDNLQA LGPCFYKLIV APSTQSHNLR IPEKYVRTYY 60 EEQLANDYAK LSVNDGKVWR VELFKEGGKV WLSKGWECFV KNYSLKYGYF LLFRYDEVKY 120 EYHVTIFDMT CFEIEYDQEF DNHTKDQEVI KISPQEE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 4e-21 | B3 family protein |