PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62005890-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 191aa MW: 21193.6 Da PI: 4.6213 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.8e-18 | 16 | 66 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr +k +g+Wv eIr+p gk++r++lg+f+t e+Aa a++ a+ l+g AUR62005890-RA 16 SEYRGVRKRK-WGKWVTEIREP---GKKTRIWLGSFDTQEMAAIAYDVAAFHLRG 66 569****999.**********8...557************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 191 aa Download sequence |
MEDNNTYVRS GGGISSEYRG VRKRKWGKWV TEIREPGKKT RIWLGSFDTQ EMAAIAYDVA 60 AFHLRGRGAV LNFPELADEL PCPASSRAED IRRAAQDAAA ALQTRGCLNP YNMQVAQATA 120 QSSYASSSSP MRVGLSPMQI QAINESPLDS PQMWSSMTDT HMFDDPFVYN NDFKMVGGWE 180 DEVPDDSLWD * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G71450.1 | 2e-48 | ERF family protein |