PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005736-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 423aa MW: 45613.2 Da PI: 8.1677

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005736-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.8	1.3e-29	156	214	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg+Hnh+ AUR62005736-RA 156 HDGCHWRKYGQKIAKGNPCPRAYYRCTVSpNCPVRKQVQRCPHDMSILITTYEGTHNHP 214 7************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MESELSGSSI ICNDQEELLK SAKAKMGEVK EENESWSSNK KHSHDNNNKK QESDYSLNKR 60 RKVEAGGLEL GLDYRKIQHN STASATDSIK YSSLENSNKE SKEDENVDTW ASSHQDLKAK 120 ENISSKEVDD QESLHQPQVK KTRVCIRSRC DSPTIHDGCH WRKYGQKIAK GNPCPRAYYR 180 CTVSPNCPVR KQVQRCPHDM SILITTYEGT HNHPLPLSAT AMASATSAAA SMIKSSSLTS 240 QTPTLTNPSL TTSSLGLHST NFMTTFNNNP SLISASCHNS HPTVTLDLTV PNSGFSSFDW 300 LSSSSSYSSS TSARNSSFLN FSSSPASSSL PSLDFTTSLP TTAVATKAIA SNPNFQSVLA 360 AAISSYVGNK ANNDQKMASF PSSGAFQSTE SGRSLTLFPN SLPLSTSKSN ASVGADARDH 420 IG*

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MESELSGSSI ICNDQEELLK SAKAKMGEVK EENESWSSNK KHSHDNNNKK QESDYSLNKR  60
RKVEAGGLEL GLDYRKIQHN STASATDSIK YSSLENSNKE SKEDENVDTW ASSHQDLKAK  120
ENISSKEVDD QESLHQPQVK KTRVCIRSRC DSPTIHDGCH WRKYGQKIAK GNPCPRAYYR  180
CTVSPNCPVR KQVQRCPHDM SILITTYEGT HNHPLPLSAT AMASATSAAA SMIKSSSLTS  240
QTPTLTNPSL TTSSLGLHST NFMTTFNNNP SLISASCHNS HPTVTLDLTV PNSGFSSFDW  300
LSSSSSYSSS TSARNSSFLN FSSSPASSSL PSLDFTTSLP TTAVATKAIA SNPNFQSVLA  360
AAISSYVGNK ANNDQKMASF PSSGAFQSTE SGRSLTLFPN SLPLSTSKSN ASVGADARDH  420
IG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-49	WRKY family protein