PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62005735-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | Whirly | ||||||||
Protein Properties | Length: 244aa MW: 26959.3 Da PI: 9.5972 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 71.9 | 1.1e-22 | 104 | 161 | 1 | 58 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfals 58 s+yk+kaal+v++++p+f+ ldsg++k++r+G +ll++a+a+++r+ydW++kq+ +l+ AUR62005735-RA 104 SIYKGKAALTVEPKAPEFVPLDSGAFKVSREGYVLLQFAPAAGVRQYDWSRKQTSSLA 161 7****************************************************98886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MVQQLLSSSS SNFSIGAQFQ NHGPTSLPYL SLSSHNSIIT NTAQFKLPRN WVSHVSSSKL 60 SLSVKCRQSS EYFDKSPPRF SPSYSPNPST TSSGFPPKVF VGHSIYKGKA ALTVEPKAPE 120 FVPLDSGAFK VSREGYVLLQ FAPAAGVRQY DWSRKQTSSL ALDLLGSEHP LQYIQGVQNK 180 LLNLDENVYI PISKAEFAVL VTAFNFVLPY LLGWNVFADN IKPDDSNRIN SSNTRTGDYE 240 WNR* |