PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004853-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 880aa MW: 98522.7 Da PI: 4.5743

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004853-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4e-08	14	43	1	30
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 +g WT+eEd++l+ +++++G +W+t ++ AUR62004853-RA 14 KGQWTPEEDQILISYIQRFGHANWRTLPKQ 43 799***********************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence
MVRKPCCGNM GLKKGQWTPE EDQILISYIQ RFGHANWRTL PKQAEKVNVT QDESSEEFME 60 DETTGEVEGG KVIKKRARYI LDEDEIEEDV IAKDMKSSKG ADDLNNKDKN NVDLNAENSN 120 VDNVNAAKDV TAEAVVQSSD NVNIMDEHKP DVDVKPKVAN TRARRGRKPA ANSSQVVEVV 180 KLEEGSFDYE NWKFDLPSGK SFQLTTADVR DVFMIPMGAT SVPLSLKRKN SDLKTNWRKL 240 YGTKSLDISV PLLWIKMIND EEMLKGNGEF KKCFVMYVMV TLLAPTSNRS ADFKLVLALE 300 DVKLIKNFKW FQIQVEGFSV DKSLPLIKHW DDETFKDRLA KEMGHYGNGS LDEDTFPVTD 360 VGIADELEKL DLKERKTMVS SVAKKKDEKI EKKKGKKKET VEQMDDANMI EKIFEKYKPS 420 DGVEDENEAD NVLKRIRFTS KANDSEIEKI IEKYKVSEDV QDDQSEDNEA VGGGNSEVRG 480 DIGQILDIAG SSRLDVEKNY MLMQRDMKLM SYQFELYIES MKRQCKPVEV PVQQLEKDKS 540 PMLSQLDPIY NDQSFWDQID KIVKQNIEMK KVVDEMPSFN LFYCTDPGNG SVSNQLSLGG 600 FQTIIQNVDI QSVSTEEDPM FDDFLDEIND NASTDDKQEE TSVADVGTSA ADVQVGEPLD 660 FQAAFDIGAS VNSASIAKVV AQSNFASDLG GPITDCTFDD VAPVNSDLIA KAIVVYSPVI 720 STQDLATSQD RELSKKDGTF SKQAVDGTFS QQPVDPSFKQ PVDTSSKQVV DTLKKASYSK 780 KKTSQKKNSE KKISKKKDST QVKGKKRERK EVLTSFVAGC TPEESYQILR KKWDDAGMPD 840 GEENINSDDT AVQSAELISC DINCGAYGGY KLQLIPQNL*

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence

MVRKPCCGNM GLKKGQWTPE EDQILISYIQ RFGHANWRTL PKQAEKVNVT QDESSEEFME  60
DETTGEVEGG KVIKKRARYI LDEDEIEEDV IAKDMKSSKG ADDLNNKDKN NVDLNAENSN  120
VDNVNAAKDV TAEAVVQSSD NVNIMDEHKP DVDVKPKVAN TRARRGRKPA ANSSQVVEVV  180
KLEEGSFDYE NWKFDLPSGK SFQLTTADVR DVFMIPMGAT SVPLSLKRKN SDLKTNWRKL  240
YGTKSLDISV PLLWIKMIND EEMLKGNGEF KKCFVMYVMV TLLAPTSNRS ADFKLVLALE  300
DVKLIKNFKW FQIQVEGFSV DKSLPLIKHW DDETFKDRLA KEMGHYGNGS LDEDTFPVTD  360
VGIADELEKL DLKERKTMVS SVAKKKDEKI EKKKGKKKET VEQMDDANMI EKIFEKYKPS  420
DGVEDENEAD NVLKRIRFTS KANDSEIEKI IEKYKVSEDV QDDQSEDNEA VGGGNSEVRG  480
DIGQILDIAG SSRLDVEKNY MLMQRDMKLM SYQFELYIES MKRQCKPVEV PVQQLEKDKS  540
PMLSQLDPIY NDQSFWDQID KIVKQNIEMK KVVDEMPSFN LFYCTDPGNG SVSNQLSLGG  600
FQTIIQNVDI QSVSTEEDPM FDDFLDEIND NASTDDKQEE TSVADVGTSA ADVQVGEPLD  660
FQAAFDIGAS VNSASIAKVV AQSNFASDLG GPITDCTFDD VAPVNSDLIA KAIVVYSPVI  720
STQDLATSQD RELSKKDGTF SKQAVDGTFS QQPVDPSFKQ PVDTSSKQVV DTLKKASYSK  780
KKTSQKKNSE KKISKKKDST QVKGKKRERK EVLTSFVAGC TPEESYQILR KKWDDAGMPD  840
GEENINSDDT AVQSAELISC DINCGAYGGY KLQLIPQNL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	3e-17	MYB family protein