PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62004798-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 1057aa MW: 121140 Da PI: 9.8548 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 47.9 | 2.4e-15 | 28 | 115 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 f++l ++ lvlp kf+++++++ + ++ l+++sg +W+++l k+++ + ++GWk+Fvk n+L+e+ +++Fk++++s+f v + AUR62004798-RA 28 FQTL--TPNFHD-HLVLPEKFTAHMKSQ--LPDKVFLKSPSGGVWDIEL--LKSDDLLFVGNGWKDFVKVNELNEKCVLMFKFKRNSSF--EVLI 113 5555..334444.4********666655..8889***************..****99**************************999999..8888 PP E- CS B3 97 fr 98 f+ AUR62004798-RA 114 FD 115 87 PP | |||||||
2 | B3 | 39.2 | 1.3e-12 | 454 | 539 | 1 | 89 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.se 89 f+ v+ p +v ++ l +p k +++h + ++++++l+ ++W l + +s++ +++GWk+F+ +n L+e D++vFkl+++ ++ AUR62004798-RA 454 FIAVMQPTSVYRKFFLDIPAKWMQQHL-P-CRNQEVILRV-GKKVWHTSL--TTYSKKdASISTGWKKFALDNSLEESDVLVFKLVNQkDK 539 7889999****************9993.3.2445787766.889******..333333377999********************9976343 PP | |||||||
3 | B3 | 39.8 | 7.8e-13 | 561 | 637 | 17 | 99 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 vlp kfa h+ k++ + +l+l+ +sg++W+v + + +++ + ++ Wk+Fvk +L+e+ ++Fk++++s+f v +f++ AUR62004798-RA 561 VLPEKFA-MHM-KTHLPEKLSLKGPSGNVWQVDI--QTTDNVLLVGNEWKDFVKTYKLRENCLLMFKYKRNSSF--EVLIFDQ 637 89*****.553.3568899***************..9***9****************************99999..8888876 PP | |||||||
4 | B3 | 38.8 | 1.7e-12 | 933 | 1018 | 1 | 89 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f v+ ps+v ++ l++p + +++h ++ +++ ++l+ +++ W k+ y++k++ l++GWk+F+ +n L+e D+++Fkl + ++ AUR62004798-RA 933 FTVVMRPSSVYRRFYLSIPADWMNKHlALQ-NQD--IILRV-ENNIWHAKFYYNGKRCVGGLSGGWKKFAFENSLEEFDVLLFKLANPKD 1018 77899*********************6444.454..55544.5599*****9999999999***********************975533 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1057 aa Download sequence |
MVEHLECKHC KTWEEEMYWK HFNSMHFFQT LTPNFHDHLV LPEKFTAHMK SQLPDKVFLK 60 SPSGGVWDIE LLKSDDLLFV GNGWKDFVKV NELNEKCVLM FKFKRNSSFE VLIFDQGSSC 120 EKCKHTKSEH EGKKRTAREA SNTETIEDGG EEDSAFVVSK KSKKDDEPVV SSGAKVDTQA 180 PRKRVLNAAA KAREGTRRIL PCRLPIKRKA QSGKKSFRNE TDKELSETSQ RDVITAENGE 240 ISPEKVDSEK LESHSKKSLN KNDQISRREL IAPENGENSP TAERSKKLKG QPERELVVDR 300 APKLKPQSEK RPSSNGTPKE PTQILEKEMI TPENGKNFPV TGCSNGFKGE AEKETSRRRG 360 IIKERSQISG REVIRSNYKE TSSEEDRSRK SSGKRRRLKK QEHPNSSKKL VFKSVPEERK 420 SVVKEYMSNR RLVTEVEKED ALLRANLKQT EDSFIAVMQP TSVYRKFFLD IPAKWMQQHL 480 PCRNQEVILR VGKKVWHTSL TTYSKKDASI STGWKKFALD NSLEESDVLV FKLVNQKDKA 540 SAVMDVNIFR VIEKTTPPLP VLPEKFAMHM KTHLPEKLSL KGPSGNVWQV DIQTTDNVLL 600 VGNEWKDFVK TYKLRENCLL MFKYKRNSSF EVLIFDQESL CEEEASYFMK KCSHTKPVNE 660 NHKKRIVREG SNTNVIDDDI DDDSAYVVSK KSKNNVDGEV NCLGREENTQ NPRNQTFNMA 720 IKKNGRGRPR KIKEPCNSLS KSKAQPKEKP GINEATHEVS QVSLQHLNTP ENGESSPRKD 780 HSKKLKDQFD KNPSGNDAAQ EPGTNSGRDW STPEYREGSL EMNNHHKSKT ISGKEPSENG 840 TSEKISQFLG SKPIVLNFEE CSPTADDSHS HRRKRGRPKK QAVPMSSMKQ VSRSVVSSEK 900 ECPEYVSNRR AVTEMEKADA LLRANQEQTE KSFTVVMRPS SVYRRFYLSI PADWMNKHLA 960 LQNQDIILRV ENNIWHAKFY YNGKRCVGGL SGGWKKFAFE NSLEEFDVLL FKLANPKDDA 1020 TVFDVEIFRV IPKILPPLQA FDMMRYMYLF ELLRKR* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 394 | 398 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 1e-30 | B3 family protein |