PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004798-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 1057aa    MW: 121140 Da    PI: 9.8548
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004798-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.92.4e-1528115298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     f++l    ++    lvlp kf+++++++   + ++ l+++sg +W+++l   k+++  + ++GWk+Fvk n+L+e+ +++Fk++++s+f   v +
  AUR62004798-RA  28 FQTL--TPNFHD-HLVLPEKFTAHMKSQ--LPDKVFLKSPSGGVWDIEL--LKSDDLLFVGNGWKDFVKVNELNEKCVLMFKFKRNSSF--EVLI 113
                     5555..334444.4********666655..8889***************..****99**************************999999..8888 PP

                     E- CS
              B3  97 fr 98 
                     f+
  AUR62004798-RA 114 FD 115
                     87 PP

2B339.21.3e-12454539189
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+ v+ p +v ++  l +p k +++h  +  ++++++l+    ++W   l  + +s++   +++GWk+F+ +n L+e D++vFkl+++ ++
  AUR62004798-RA 454 FIAVMQPTSVYRKFFLDIPAKWMQQHL-P-CRNQEVILRV-GKKVWHTSL--TTYSKKdASISTGWKKFALDNSLEESDVLVFKLVNQkDK 539
                     7889999****************9993.3.2445787766.889******..333333377999********************9976343 PP

3B339.87.8e-135616371799
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     vlp kfa  h+ k++ + +l+l+ +sg++W+v +  + +++  + ++ Wk+Fvk  +L+e+  ++Fk++++s+f   v +f++
  AUR62004798-RA 561 VLPEKFA-MHM-KTHLPEKLSLKGPSGNVWQVDI--QTTDNVLLVGNEWKDFVKTYKLRENCLLMFKYKRNSSF--EVLIFDQ 637
                     89*****.553.3568899***************..9***9****************************99999..8888876 PP

4B338.81.7e-129331018189
                      EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3    1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89  
                      f  v+ ps+v ++  l++p + +++h  ++ +++  ++l+  +++ W  k+ y++k++   l++GWk+F+ +n L+e D+++Fkl + ++
  AUR62004798-RA  933 FTVVMRPSSVYRRFYLSIPADWMNKHlALQ-NQD--IILRV-ENNIWHAKFYYNGKRCVGGLSGGWKKFAFENSLEEFDVLLFKLANPKD 1018
                      77899*********************6444.454..55544.5599*****9999999999***********************975533 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1057 aa     Download sequence    
MVEHLECKHC KTWEEEMYWK HFNSMHFFQT LTPNFHDHLV LPEKFTAHMK SQLPDKVFLK  60
SPSGGVWDIE LLKSDDLLFV GNGWKDFVKV NELNEKCVLM FKFKRNSSFE VLIFDQGSSC  120
EKCKHTKSEH EGKKRTAREA SNTETIEDGG EEDSAFVVSK KSKKDDEPVV SSGAKVDTQA  180
PRKRVLNAAA KAREGTRRIL PCRLPIKRKA QSGKKSFRNE TDKELSETSQ RDVITAENGE  240
ISPEKVDSEK LESHSKKSLN KNDQISRREL IAPENGENSP TAERSKKLKG QPERELVVDR  300
APKLKPQSEK RPSSNGTPKE PTQILEKEMI TPENGKNFPV TGCSNGFKGE AEKETSRRRG  360
IIKERSQISG REVIRSNYKE TSSEEDRSRK SSGKRRRLKK QEHPNSSKKL VFKSVPEERK  420
SVVKEYMSNR RLVTEVEKED ALLRANLKQT EDSFIAVMQP TSVYRKFFLD IPAKWMQQHL  480
PCRNQEVILR VGKKVWHTSL TTYSKKDASI STGWKKFALD NSLEESDVLV FKLVNQKDKA  540
SAVMDVNIFR VIEKTTPPLP VLPEKFAMHM KTHLPEKLSL KGPSGNVWQV DIQTTDNVLL  600
VGNEWKDFVK TYKLRENCLL MFKYKRNSSF EVLIFDQESL CEEEASYFMK KCSHTKPVNE  660
NHKKRIVREG SNTNVIDDDI DDDSAYVVSK KSKNNVDGEV NCLGREENTQ NPRNQTFNMA  720
IKKNGRGRPR KIKEPCNSLS KSKAQPKEKP GINEATHEVS QVSLQHLNTP ENGESSPRKD  780
HSKKLKDQFD KNPSGNDAAQ EPGTNSGRDW STPEYREGSL EMNNHHKSKT ISGKEPSENG  840
TSEKISQFLG SKPIVLNFEE CSPTADDSHS HRRKRGRPKK QAVPMSSMKQ VSRSVVSSEK  900
ECPEYVSNRR AVTEMEKADA LLRANQEQTE KSFTVVMRPS SVYRRFYLSI PADWMNKHLA  960
LQNQDIILRV ENNIWHAKFY YNGKRCVGGL SGGWKKFAFE NSLEEFDVLL FKLANPKDDA  1020
TVFDVEIFRV IPKILPPLQA FDMMRYMYLF ELLRKR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1394398KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-30B3 family protein