PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004797-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 973aa    MW: 110112 Da    PI: 7.6443
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004797-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.11.1e-15331141098
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     +  ++ lvlp kfa++++   + + +++l+ +sg  We++l   k+++  + ++GWk+Fvk n+L+e+ ++vF ++++s+f   v +f+
  AUR62004797-RA  33 SDFHDHLVLPEKFAAHMN---ALPAKVSLKGPSGALWEIEL--LKSDDLLFVGNGWKDFVKVNDLNENCILVFNYKRSSSF--EVLIFD 114
                     334556********5553...36778***************..****99**************************999999..888887 PP
2B339.97.7e-135856601798
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     vlp kfa +++ +   + ++ l+ +sg  W+++l   k+++  + ++ Wk+Fvk ngLke+  ++Fk++++s+f   v +f+
  AUR62004797-RA 585 VLPQKFAVNMKDQ--LPDKVPLKGPSGVLWDIEL--LKSDNVLFVGNEWKDFVKVNGLKENNLLMFKYKSNSTF--EVLIFD 660
                     89*****877655..7889***************..********************************999999..888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 973 aa     Download sequence    
MEENPECNCC NTWEEEMYWK HFNSVHFCLT LTSDFHDHLV LPEKFAAHMN ALPAKVSLKG  60
PSGALWEIEL LKSDDLLFVG NGWKDFVKVN DLNENCILVF NYKRSSSFEV LIFDERSSCE  120
KESAYFVKKH RLIESNLEDQ KKRTASEASS DKIEDNDDEG PAFAVTKKSK KDGEEVVRLR  180
EKLNAPTSKK RVLCAAARPK GRLRRVVPPL NPPSDKKIKS GKSIINENLK EPNQISNQDR  240
ITSENGGILP EKDHSQKVLT KSRKKSNGKG SVDELTQNAK DLTTPENGKN SLAADHSHIL  300
KAQSENPLLK NVTAIDPSQT KVKYLLTMEN GDGLRVTDNF YSEKAPSENR LNRNDTSKDR  360
SQTLQEELIT PENSESSPVA DCSPDFEGQA EKEPNGRSIA KDAIPISVWG PLVTSDYRES  420
SPEKDHPCKS RGKRGQPKKQ VPTSSKKSGL KRGKSFSKEY KSNRRPVTEE EKNDALRRAN  480
QKQTENSFTA IMRPTCVYRR FFLQIPAEWQ FKNLFRHKQE VILRVGENSW HASIVNYGCK  540
NRGISTGWKK FSLENFLEEF DVLVFQLGGQ KDEALVVIDV DIFRVLPQKF AVNMKDQLPD  600
KVPLKGPSGV LWDIELLKSD NVLFVGNEWK DFVKVNGLKE NNLLMFKYKS NSTFEVLIFD  660
QGSSCEREST YFVNKCMHPK SDLGDIEKKT TRKASSTEVI EDDDEEYSAF LVSKKSKKDN  720
EGVVCSGEKV KTPTPSPSGN DAAYESRPIS KRDYIAFQNE ENFRVIDHSH KLKALYEKGL  780
SRNDTLEELS QILRKEMTTL ENGECTPVVD CSNIFKDKAE MGPSGSSGTF KELNQISRPV  840
VIRPDYRDCS PEGDDQCHKS HGKIGRPKKQ ALPNSPGELN VPVEWLHKHS LRHNQEVVLH  900
VGEKTWLTTY YPYDKGQGLG PGWKKFALEN FLAEFDVLVF TPIDKKDEAA MVINVDIFRV  960
DSTIMPLPPI LS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-29B3 family protein