PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004570-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 854aa MW: 93307.1 Da PI: 5.1443

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004570-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.7	3e-09	24	54	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 r rWT+eE+ ++++a k++G W +I + +g AUR62004570-RA 24 RERWTEEEHNRFLEALKLYGRA-WQRIEADIG 54 78****************88.**99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 854 aa Download sequence
MNNYSSGEEP IVKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE ADIGLVYGND 60 KECLVTGYSD SDYAADVDTR RTYWDKDRCP DKKSCTEVLF KVSGKNHSSN VVPDNVNYLV 120 MLSMLEIKEP EITLEYCGLE IDSQRLGHRP AEKKEKDKGK LQNVLKSARS YSEMPEVDEK 180 LVSSIELLEK EALVKGVPIG QAIDIEIPPP RPKRKPSNPY PRKTGAISSP NTQVRAKDGK 240 QIPGSIHNTE EAIDLEKEQF PEEPGGDDGE SSPKEISGGD KCTEAFTIFR KAPSALGASS 300 NELSARAMGT TRKLSNFKEF VPIRKPLADN ETRDLNVADG HNTSHEPDKS DVVEMIQNDS 360 ENETNAAKTF PRHAPVQILD GNLASCSQGF SSDVSYQEPA FHPMGTPGQP AFFSNPTVSA 420 AVESQTSTSK SNNHQMFPNS HPPFSPFPNS QENYSFLQMS STFSSMIVSA LVQNPAAHAA 480 ASFAASFWPC PNVGNSANSP AGSNGGFPPR PMNSAPSVAA IAAATVAAAT AWWAAHGLLP 540 LCAPLHGGYS FPPASATAPL ANFGQTPPAN EEKEENNFQI PGSQVQQPNQ ELSVALKPQH 600 SASKSSATSS SDSGNIISEK MDIGVAADNN EKDVPDLSEQ NDTSKGKSKK QVDRSSCGSN 660 TPSGSDIETD ALEKVDKEKE EANEPDVSRP TSEPSSRRNR IIGNLYDSWK EVSEGGRLAF 720 QALFSREVLP QSFSPPLNFT GKSQEMNGFV EEFRQTAEES NNASQLDLNS NAWESCSSNQ 780 GVEKIKLREE DNCKDGLLTY SHEQGKLKTN RTGFKPYKRC SVEARESSRV MNSSAPEQEK 840 CSKRLRLDGE AST*

Sequence ? help Back to Top

Protein Sequence Length: 854 aa Download sequence

MNNYSSGEEP IVKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE ADIGLVYGND  60
KECLVTGYSD SDYAADVDTR RTYWDKDRCP DKKSCTEVLF KVSGKNHSSN VVPDNVNYLV  120
MLSMLEIKEP EITLEYCGLE IDSQRLGHRP AEKKEKDKGK LQNVLKSARS YSEMPEVDEK  180
LVSSIELLEK EALVKGVPIG QAIDIEIPPP RPKRKPSNPY PRKTGAISSP NTQVRAKDGK  240
QIPGSIHNTE EAIDLEKEQF PEEPGGDDGE SSPKEISGGD KCTEAFTIFR KAPSALGASS  300
NELSARAMGT TRKLSNFKEF VPIRKPLADN ETRDLNVADG HNTSHEPDKS DVVEMIQNDS  360
ENETNAAKTF PRHAPVQILD GNLASCSQGF SSDVSYQEPA FHPMGTPGQP AFFSNPTVSA  420
AVESQTSTSK SNNHQMFPNS HPPFSPFPNS QENYSFLQMS STFSSMIVSA LVQNPAAHAA  480
ASFAASFWPC PNVGNSANSP AGSNGGFPPR PMNSAPSVAA IAAATVAAAT AWWAAHGLLP  540
LCAPLHGGYS FPPASATAPL ANFGQTPPAN EEKEENNFQI PGSQVQQPNQ ELSVALKPQH  600
SASKSSATSS SDSGNIISEK MDIGVAADNN EKDVPDLSEQ NDTSKGKSKK QVDRSSCGSN  660
TPSGSDIETD ALEKVDKEKE EANEPDVSRP TSEPSSRRNR IIGNLYDSWK EVSEGGRLAF  720
QALFSREVLP QSFSPPLNFT GKSQEMNGFV EEFRQTAEES NNASQLDLNS NAWESCSSNQ  780
GVEKIKLREE DNCKDGLLTY SHEQGKLKTN RTGFKPYKRC SVEARESSRV MNSSAPEQEK  840
CSKRLRLDGE AST*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-58	MYB_related family protein