PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004404-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 391aa    MW: 43035.8 Da    PI: 8.069
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004404-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.94.7e-1364108147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I   +g  +t  q++s+ qky
   AUR62004404-RA  64 RESWTEQEHDKFLEALQLFDRD-WKKIEGFIG-SKTVIQIRSHAQKY 108
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MVSVNPNPTQ SQGFNLEFTN SGMPLPGVNP IPPVNSPVSG GSAVPMSEDH SKKVRKPYTI  60
TKSRESWTEQ EHDKFLEALQ LFDRDWKKIE GFIGSKTVIQ IRSHAQKYFL KVQKSGSNER  120
VPPPRPKRKA AHPYPQKASK TAPAINQSMG QYQNSPVGVL EPGYVYHHDP SSVLTNQSGS  180
APASSWTFGS VPVVNTASLR RDDAALAMPS MTPTGCCSSS NESGSTWPTA GATDQTTQGK  240
RIKVVPDFAQ VYSFIGSVFD PNARDHLQRL KTMDPINVET VLLLMRNLSV NLLSPEFEEY  300
RKLFSSYDVE SESNLGREQS GLPPRSSYLV VPGFCTGVLL QPTNRLLETQ RVLLLLLGML  360
KLFDVAANEN PLYILNPENV MYIEEGPELV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.22e-71MYB_related family protein