PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004302-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 778aa    MW: 84781.4 Da    PI: 6.1807
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004302-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.82.8e-2167122156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe++F+++++p++++r eL+kkl L++rqVk+WFqNrR+++k
  AUR62004302-RA  67 KKRYHRHTPQQIQELEAVFKECPHPDEKQRLELSKKLCLETRQVKFWFQNRRTQMK 122
                     688999***********************************************999 PP
2START188.24.3e-592765011206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela++a++elvk+a+ +ep+W +s      e +n +e+ +++++  +     +  ea r+ g+v+ ++  lve+l+d + +W e+++    +a+t
  AUR62004302-RA 276 ELALAAMDELVKLAQTDEPLWLRSMdaggrEVLNHEEYNRSITSCIGlkpngFVPEATRENGMVIINSLALVETLMDAN-RWAEMFPgmiaRAST 369
                     5899*********************999997788888888876666688888899************************.*************** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     ++vissg      galq+m aelq+lsplvp R + f+R+++q+ +g+w++vdvS+d  ++ + s+ +v +++lpSg+++++++ng+skvtwveh
  AUR62004302-RA 370 TDVISSGmggtrnGALQVMHAELQVLSPLVPvRVVNFLRFCKQHAEGVWAVVDVSIDCIRESSGSPTYVNCRRLPSGCVVQDMPNGYSKVTWVEH 464
                     *************************************************************999******************************* PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++++++h l+rslv+sg+ +ga++w  tlqrqce+
  AUR62004302-RA 465 AEYDESSVHLLFRSLVSSGMGFGAQRWITTLQRQCEC 501
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 778 aa     Download sequence    
MEGHGEVTAR VTGDQNYDGN GNNNGAGVSS IGVRRSREDE HESRSGSDNL DGASGDEQDI  60
ADLPPRKKRY HRHTPQQIQE LEAVFKECPH PDEKQRLELS KKLCLETRQV KFWFQNRRTQ  120
MKTQLERHEN SILRQENDKL RAENMSIREA MRNPMCTNCG GPAMIGDISM EEQHLRIENA  180
RLKDELDRVC ALASKFLGRP VSSLSTLSAP PMPNSSLELA VGNNGYGHLT TVTTSSLPLG  240
DFGSGISNAM PVVSPTKSTA NVTGMERSFE RSMYLELALA AMDELVKLAQ TDEPLWLRSM  300
DAGGREVLNH EEYNRSITSC IGLKPNGFVP EATRENGMVI INSLALVETL MDANRWAEMF  360
PGMIARASTT DVISSGMGGT RNGALQVMHA ELQVLSPLVP VRVVNFLRFC KQHAEGVWAV  420
VDVSIDCIRE SSGSPTYVNC RRLPSGCVVQ DMPNGYSKVT WVEHAEYDES SVHLLFRSLV  480
SSGMGFGAQR WITTLQRQCE CLAILMSSNI PSGEHTAITA SGRRSMLKLA QRMTNNFCAG  540
VCASTVHKWN KLNIGNVDED VRVMTRKSID DPGEPPGIVL SAATSVWLPV SPQRLFDFLR  600
DERLRSEWDI LSNGGPMQEM AHIAKGQDQG NCVSLLRAGV CPLSFPSPLN IILTLTAMNP  660
NQSSMLILQE TCTDSSGSLV VYAPVDIPAM HVVMNGGDSA YVALLPSGFA IVPDGPGSRG  720
PSNGGPQRVG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK AALNCES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein