PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004246-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 287aa MW: 31515.7 Da PI: 5.2511

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004246-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.1	9e-10	94	139	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+ + + f L +++P + kK++K +iL A++++k+Lq AUR62004246-RA 94 HILAERKRREVLSHMFISLSSMVPGL-----KKMDKTTILGGAIKHMKQLQ 139 7889********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MEQVVASFDE QLAGVLLGDD DFSYPLSVDS NTFYPQWDIG SDLLLDQIIT PPCSGVVEEP 60 RWLKKRKDES AEKQAASSGG RPRRKRQATQ VYDHILAERK RREVLSHMFI SLSSMVPGLK 120 KMDKTTILGG AIKHMKQLQE KVNQLEVAAA ELNTTNISAS CGSGNGGFSG NDGSDNNNGE 180 NLINKNSLLE IEVKISDNTL LLKVYCEKRK DIISELIAVV DKHELSITNC GVIPFGNLTL 240 DITIVAKMKE GFNNNVKGFV RSLRSALEST SPQRQASEIQ NEDCDA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	86	KKRKDESAEKQAASSGGRPRRKR
2	65	87	KKRKDESAEKQAASSGGRPRRKR
3	81	85	RPRRK
4	83	105	KKRKDESAEKQAASSGGRPRRKR
5	83	124	RRKRQATQVYDHILAERKRREVLSHMFISLSSMVPGLKKMDK
6	84	106	KKRKDESAEKQAASSGGRPRRKR
7	98	103	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	8e-37	bHLH family protein