PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003900-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 366aa    MW: 41980.7 Da    PI: 5.2341
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003900-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.17.6e-10421121988
            FAR1  19 skkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     +++ +++++  +r +vCs  g+++e+k+ ++++  ++ + rtgCka+++   +k +g  +v +    HnH+
  AUR62003900-RA  42 NRRDDKDRTPRQRFLVCSFAGFKQEKKHGEQSKVYQKRNFRTGCKAHIQFDIDKvSGLNVVVNHTMVHNHS 112
                     455667778889999**************999999******************999999***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MVYQSEFRHD SNARFVDDAN DYDINDEGEV EGIVNLNEDR LNRRDDKDRT PRQRFLVCSF  60
AGFKQEKKHG EQSKVYQKRN FRTGCKAHIQ FDIDKVSGLN VVVNHTMVHN HSRVPVSKRH  120
LIRSHRKVMV TNEQVVMMSS LTESSIPVAD AMRVLKHQAG GEANLSFLCR DAYGALSQHK  180
KMMFDSCDAK RLLSYFKERK SSEYDFFYDF DVDEKGHLQS FFFRDNRMKV DYDAFDRAQN  240
DLSARAVIEE AIEECTARIN LLMGEDKDVP PELSKTNEQD VTQEKGDGSL LEPAVIFEEL  300
AEEHGGLEKE HGGFEREHGG IVKEHTVQDF LHVPDGNVLA HSNEFGGSLE FFEPDDYFGV  360
NIREL*