PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003880-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 265aa    MW: 29468.1 Da    PI: 5.7861
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003880-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.24e-36101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+ye+++d++ +++isw eng++fvv+++ efak++Lpk+Fkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fkk++k+ll+ 
  AUR62003880-RA  10 FLTKTYEMVDDKTSDDVISWGENGSTFVVWKTAEFAKDLLPKFFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANDNFKKDQKDLLSG 95 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  AUR62003880-RA  96 IRRRKA 101
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MGQRSTPAPF LTKTYEMVDD KTSDDVISWG ENGSTFVVWK TAEFAKDLLP KFFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANDNFKKDQK DLLSGIRRRK ATLAVKVTGV VTSPCISGDD  120
AGSTSTASPG SVEIADLSGE NEKLRRDNEM LNSELAQTKK QCEELMGFLT AHLKVGPDEI  180
NHILEQGMVV SCGAHKDGFV GEDDFGGVDN NEEEDGFKLF GVWLNEVGGV KKRGRCYDEF  240
QRDNNSNLGF NGAQCRRKIM KIPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.17e-82HSF family protein