PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003865-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 964aa    MW: 110249 Da    PI: 9.6737
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003865-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.56.7e-15790899
                    -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                     +v+k ++l l+k+f+++h  +   ++t++le e+g+++evk+    +s+r  l++GW++F  + +L+egD vv++l++ ++f  +v ++r+
  AUR62003865-RA  7 WNVSKGCCLLLSKSFCKAHLPV--VDTTMVLEAETGERYEVKF--LSRSCR--LSGGWRRFSVSMKLEEGDAVVLHLVEVTKF--KVYIIRA 90
                    578999*************533..4579***************..777666..***********************9987777..9998886 PP
2B349.29.2e-16626713196
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k l++s+v+   ++ lp +f+++h   +++++ +tle++s + +++k+  rk++    l++GWk+F+ + +L  gD++vF+l+ + +f  +v 
  AUR62003865-RA 626 FIKSLVKSHVTGGFWMGLPAPFCQKHL--PPKDTIITLETQSKKLFKIKYLARKTG----LSGGWKGFAISERLLIGDVLVFQLIAEAKF--KVY 712
                     89************************5..346779***************666665....************************997777..665 PP

                     E CS
              B3  96 v 96 
                     +
  AUR62003865-RA 713 I 713
                     5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 964 aa     Download sequence    
MLWLKNWNVS KGCCLLLSKS FCKAHLPVVD TTMVLEAETG ERYEVKFLSR SCRLSGGWRR  60
FSVSMKLEEG DAVVLHLVEV TKFKVYIIRA NSSDEVNLPV HVFNLVVSRV KRSVSSKADR  120
SQLFIYRRGE VQEYLQGKQR EFKADKIRGN DTRVSQVLRK SRLVQVSKLI VGHPVTVKWL  180
VKSYTSGSSL PLPTTFCRAL LPLEDAIMTL ETEIGVQYEI KYLAQHSILS GGWRKFAMHM  240
KLEAGMLLFS TYEATKFKVY IIRKNANEVR LPVHILELLS HAERSVSSKE DSKHLIVYRR  300
RKENQIAGNY SCKSARLNSR NAEGSMLLND RILFSNIKSF EEFKAAIHEL IQNHELPHYA  360
IQEYYQLCCS QNAFLHADLF RGINTGVYNQ IIVRAIRNII FDTVNLANIL STCKLSTFLQ  420
KYESMDKALK TFEVLGMNVS FLRARLHHLK NLAVSSEGAA DRIQYEVACH ERGRAKGEVR  480
KLELILAKLQ ALKPNPFEDK HREGNSWLED VKVEISNLQD LIAELGEFFS QYDAHIETLK  540
LKAKAHELKF QEEEETSSKE RKSKRKYVNR TWSRSSSDIS GLWHQHRKPK RCKLNVQKNL  600
NVKSKSFAAT QAEELRSKLD PRYPSFIKSL VKSHVTGGFW MGLPAPFCQK HLPPKDTIIT  660
LETQSKKLFK IKYLARKTGL SGGWKGFAIS ERLLIGDVLV FQLIAEAKFK VYIVKEYKVT  720
EVDGALFLLK LDTPEKQSDP GARKCIDLPQ VDQRSMQPPE NSESNSTENS FGSRVADGFP  780
ICEEAALSPS AVSTFDNFSI VINDLLKDYE LPRHIKWSYY KLCCSQDSLL HANLPHWMNH  840
ILIGGVIIET VTIADALRQC DLSTSKEEFA IWDKTLRALE LLGMNNGFLR SHLHHLQRIV  900
HDPEVATYNQ RCLELCSENS RAEDEIRSLT ARLAELKKAH KKRAADIDNL KSKINSHELK  960
FQE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.17e-38B3 family protein