PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003800-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CAMTA

Protein Properties

Length: 987aa MW: 111419 Da PI: 7.0408

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003800-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.4	3.6e-55	21	136	3	118
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + ++rwl++ ei++iL+n+++++++ e+++ p+sg+l+L+++k++ryfrkDG+swkkkkdgktv+E+he+LK g+++vl+cyYah+e+n++fqrr AUR62003800-RA 21 EAQHRWLRTPEICEILQNYKRFNIAPEPPNLPPSGALFLFDKKVLRYFRKDGHSWKKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEDNENFQRR 115 569****************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 +yw+L+eel++ivlvhy+evk AUR62003800-RA 116 SYWMLKEELSHIVLVHYREVK 136 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 987 aa Download sequence
MAQSNHLEFG NQLDIEQILF EAQHRWLRTP EICEILQNYK RFNIAPEPPN LPPSGALFLF 60 DKKVLRYFRK DGHSWKKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRSYWML 120 KEELSHIVLV HYREVKGYRT AFNRFKETEE DIANTQNKQI ICNSEAESSL NSGLQQNCCP 180 MLSQNNDSRS PQASNYEDAE SGNQAKSTTV SSLEIDVDRP VQKHQNEPWG WENVLENHNV 240 RVQFASLESS ILNVQSDSVH TNSKQENVIT KLLLTDPCCE TQASRDLAQG SEEWQAMHAM 300 DYQTEPSALA CKEDQVDVVS NLTGVKNSSH FSSARTLLDR PVKDETLPKI DSFSQWMCKE 360 LEDVEPVKPS SGAYWDADDK RSDCPNLPPQ DEFDSYTIGP SLSQDQHFKI IDFAPNWGYA 420 GSETKVLITG KFMKTRLGAE NCQWSCMFGE VEVPAEVIAD GALRCHAPPH CVGRVPFYVT 480 CSNRLACSEV REFEYQDKFM HAVDATSLIQ IKFCKLLSLG SSYRQNIVPC NGDGNSDLDH 540 EITSLQKGND NEWFHILELS SKEEFSLGEL KDRLAEKIIK ERFCEWLLCK RTEGGKGPRV 600 LDENGQGVLH FAAALGYDWA ISLTVAAGIS INFRDVRGWT ALHWAAYYGR ERTVVYLISL 660 GASAGALTDP SPTYPMGRTP ADLASENGHK GISGFLAESA LSAHLECLTL KDKFKQDSTV 720 EVLGMTSVLT ATERTATPIS KGVNLDGLSL KDSLAAVCNA SQAAARIHQV FRSHSFKRNR 780 RREFGNDKKE TPDEYALSAV TLNSPKRGQH DEPVHAAAVR IQNKFRSWKG RREFITLRKK 840 IVKIQAHVRG HQVRKHYKAF VWSVGIVEKV ILRWRRKKSG LRGFKSESLP VTKPQSEGKS 900 FEDDYDFFKE GRKQTEQRLQ KALSRVKSMV RYPEARDQYR RLLTAVSEIK DMKDGCSNAI 960 DGAYAATSMG DDLVDLDRLL NDGTTP*

Sequence ? help Back to Top

Protein Sequence Length: 987 aa Download sequence

MAQSNHLEFG NQLDIEQILF EAQHRWLRTP EICEILQNYK RFNIAPEPPN LPPSGALFLF  60
DKKVLRYFRK DGHSWKKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRSYWML  120
KEELSHIVLV HYREVKGYRT AFNRFKETEE DIANTQNKQI ICNSEAESSL NSGLQQNCCP  180
MLSQNNDSRS PQASNYEDAE SGNQAKSTTV SSLEIDVDRP VQKHQNEPWG WENVLENHNV  240
RVQFASLESS ILNVQSDSVH TNSKQENVIT KLLLTDPCCE TQASRDLAQG SEEWQAMHAM  300
DYQTEPSALA CKEDQVDVVS NLTGVKNSSH FSSARTLLDR PVKDETLPKI DSFSQWMCKE  360
LEDVEPVKPS SGAYWDADDK RSDCPNLPPQ DEFDSYTIGP SLSQDQHFKI IDFAPNWGYA  420
GSETKVLITG KFMKTRLGAE NCQWSCMFGE VEVPAEVIAD GALRCHAPPH CVGRVPFYVT  480
CSNRLACSEV REFEYQDKFM HAVDATSLIQ IKFCKLLSLG SSYRQNIVPC NGDGNSDLDH  540
EITSLQKGND NEWFHILELS SKEEFSLGEL KDRLAEKIIK ERFCEWLLCK RTEGGKGPRV  600
LDENGQGVLH FAAALGYDWA ISLTVAAGIS INFRDVRGWT ALHWAAYYGR ERTVVYLISL  660
GASAGALTDP SPTYPMGRTP ADLASENGHK GISGFLAESA LSAHLECLTL KDKFKQDSTV  720
EVLGMTSVLT ATERTATPIS KGVNLDGLSL KDSLAAVCNA SQAAARIHQV FRSHSFKRNR  780
RREFGNDKKE TPDEYALSAV TLNSPKRGQH DEPVHAAAVR IQNKFRSWKG RREFITLRKK  840
IVKIQAHVRG HQVRKHYKAF VWSVGIVEKV ILRWRRKKSG LRGFKSESLP VTKPQSEGKS  900
FEDDYDFFKE GRKQTEQRLQ KALSRVKSMV RYPEARDQYR RLLTAVSEIK DMKDGCSNAI  960
DGAYAATSMG DDLVDLDRLL NDGTTP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein