PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62003512-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 419aa MW: 46472 Da PI: 5.6506 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38 | 2.9e-12 | 113 | 189 | 1 | 83 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k++++s+v+ +l lp+kf++eh + ++ t++l de g+ ++ + ++ + l++GW++F ++L egD+++ AUR62003512-RA 113 FLKTMLKSHVTGGFWLGLPRKFCDEHLPI--CDCTVVLVDEAGKGFDTVY--LAGKAG--LSGGWRGFSIYHELLEGDVLIYI 189 89************************755..7889***************..555544..9******************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence |
HKQARIVSDD ESSEDEELIT STPPLKKGST KRKRIKSIVK AIGNPRTPKL SKKKRIKIND 60 LSINENVKAT YHSRVKKSQR MDLSVPLSMD DKSSSMKRAE EVQANLSAES PSFLKTMLKS 120 HVTGGFWLGL PRKFCDEHLP ICDCTVVLVD EAGKGFDTVY LAGKAGLSGG WRGFSIYHEL 180 LEGDVLIYII REQSFGEVDG ALGLLTLDSG VGERKSEDHS QMVQTEDNYT AVDHLSSSDI 240 HLGSEVLDGI RLSDSSIKFE GVSDLKNFSI IVDALLLDSK FTDSSRKKYY ELCCNQKSFL 300 QEHFLKGLNC HLVVGIILET VNIADAIRSY EEAPTSHEDL QSWEITLRGF ELLGMKVEFL 360 LASINKLLGH SVESEAVNLK ESMEKIDFEM DMEIAMASSW KKESKVEGIP AAVCQCGD* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 57 | KRKRIKSIVKAIGNPRTPKLSKKKRIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 1e-33 | B3 family protein |