PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003512-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 419aa    MW: 46472 Da    PI: 5.6506
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003512-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3382.9e-12113189183
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                     f+k++++s+v+   +l lp+kf++eh  +  ++ t++l de g+ ++  +    ++ +  l++GW++F   ++L egD+++  
  AUR62003512-RA 113 FLKTMLKSHVTGGFWLGLPRKFCDEHLPI--CDCTVVLVDEAGKGFDTVY--LAGKAG--LSGGWRGFSIYHELLEGDVLIYI 189
                     89************************755..7889***************..555544..9******************9865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
HKQARIVSDD ESSEDEELIT STPPLKKGST KRKRIKSIVK AIGNPRTPKL SKKKRIKIND  60
LSINENVKAT YHSRVKKSQR MDLSVPLSMD DKSSSMKRAE EVQANLSAES PSFLKTMLKS  120
HVTGGFWLGL PRKFCDEHLP ICDCTVVLVD EAGKGFDTVY LAGKAGLSGG WRGFSIYHEL  180
LEGDVLIYII REQSFGEVDG ALGLLTLDSG VGERKSEDHS QMVQTEDNYT AVDHLSSSDI  240
HLGSEVLDGI RLSDSSIKFE GVSDLKNFSI IVDALLLDSK FTDSSRKKYY ELCCNQKSFL  300
QEHFLKGLNC HLVVGIILET VNIADAIRSY EEAPTSHEDL QSWEITLRGF ELLGMKVEFL  360
LASINKLLGH SVESEAVNLK ESMEKIDFEM DMEIAMASSW KKESKVEGIP AAVCQCGD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13157KRKRIKSIVKAIGNPRTPKLSKKKRIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-33B3 family protein