PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003315-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 1577aa    MW: 177368 Da    PI: 8.4833
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003315-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.52.3e-135646431799
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                      lpkkf+ ++++  + +  ++++ ++g  W v+l  ++ s+ ++lt + WkeFvka  L+ +D ++Fk+d++ ++f   v +f++
  AUR62003315-RA 564 KLPKKFT-ANEI-ARLPENVIVKGPNGIIWHVNL-LSNDSNIVMLTgDVWKEFVKAYSLQKNDLLIFKYDRNdKSF--EVLFFDQ 643
                     69****8.6643.467789***************.56777777776488*********************977777..7777775 PP

2B351.42e-16837932199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                     f+ v+ ps+v k+  l lp kf+ ++++  + +  ++++ ++g  W v+l+ ++ s++++lt + W+eFvka  L+ +D ++Fk++++ ++f   
  AUR62003315-RA 837 FIIVMRPSHVYKRFSLKLPEKFT-SNEIA-KLPENVIVKGPNGIIWHVNLQ-SNDSNHVMLTgDVWQEFVKAYSLQNNDLLTFKYNRTdKSF--E 926
                     78899*****************9.77554.47779***************5.6666666666478********************9866666..8 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v +f++
  AUR62003315-RA 927 VLFFDQ 932
                     887775 PP

3B342.31.3e-1311321229198
                      EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS
              B3    1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sef 90  
                      f+ v++ps v ++  lv+p +   +  + +k   ++++l++ + ++Wev +++ +++g+  +++GWk+F+ +n L+e D+++F    ++ ++f
  AUR62003315-RA 1132 FIVVMKPSQVYNNFALVIPQSWNYKGfSRDK--RQEVILRT-NDNTWEVSFCIINRRGHGAFRGGWKKFALDNFLEESDSCLFVPGgQEnKRF 1221
                      8899*****************9644445444..44788776.889******9999999989***********************662445777 PP

                      ..EEEEE- CS
              B3   91 elvvkvfr 98  
                       l v++fr
  AUR62003315-RA 1222 VLDVSIFR 1229
                      77777776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1577 aa     Download sequence    
MKEEEWKILD RQALGVIRLT LAKSVAYNVK DVTTTVGVIK ALTNMYEKPS AMNKVFLMRR  60
LFEIEMNDGG SAPEHINESN SIISQLASLK CDDVRDLILS ESLRRKNSGE SSGGAYSSKG  120
RGRGRQQRGA QKGRSKSRGR SKLKGKVNIV CWGCGVKGHT KRDCPNPKKK GGSNHKNHDD  180
ASSSVSLASS DELGDALILS VDSPIESWIL DSGASFHSSP CKEIFQNFKS GKFGKVYLAD  240
DEPLDIVGKG DFMIKTSSGS SWKLEDVRYI PKLRKNLISV GQLDSSGFRT MFGEGDEWKY  300
VELDGEVKSG KEVEQVEVEV QIQQTSPQHS AHVPVDSDSS DSDDDDHFET DERVVMGEPV  360
VVQGDISTPP TVRRSSRPIK PPNRYSPSLH YLFMSNLGER HWEAVKWLLR YLLGTSSMAL  420
CFGRNEVVLE GFVDADFGGC YDSSKSTSGY VYTIGGTTIS WMSKLQKCVS MSTTEAKYVA  480
MSEAGKEMEW LKGFLEEMSM KQDVCALYSD SQSAVQLAKN TMFHYRTKHI KRRYHYTRSL  540
VKDGTMCLRK IAGSKNPANM LTKKLPKKFT ANEIARLPEN VIVKGPNGII WHVNLLSNDS  600
NIVMLTGDVW KEFVKAYSLQ KNDLLIFKYD RNDKSFEVLF FDQTNSCERE SSYFVRKCEQ  660
PQSNSGSDEQ AKSDSFEYII CSSDSTAHTD RDLDEEQDED EPGESNKDRS TSKQQNSEKD  720
NESSPKEVPS NCLKKRKSIG MILKRDKRRA FIEDDSISKD KCSKVNGYSS KKTHSHSAAS  780
DSDKDGSDYV PLFENMKRKS STVVAAASYR SNRRPVTDAE KEKAVALASE NAIGESFIIV  840
MRPSHVYKRF SLKLPEKFTS NEIAKLPENV IVKGPNGIIW HVNLQSNDSN HVMLTGDVWQ  900
EFVKAYSLQN NDLLTFKYNR TDKSFEVLFF DQTNSCERES SYFVRKCEQP QSNGGFDEQA  960
KSDSFDKIIC SSDSTAHTDR DLDDERDEDE DENEPSRKSN KHKSTSKQPN SLKKNQSTPK  1020
EALSNHSRKR KFTRFDKGER DKRKAFIIED DSISKKNNSL KVNGSNLNKT RSHSAARVSN  1080
RNDVPIYVRM SRKSSTVVAA AASYISNRRP VTDEEKEKAY VLATKYATDE SFIVVMKPSQ  1140
VYNNFALVIP QSWNYKGFSR DKRQEVILRT NDNTWEVSFC IINRRGHGAF RGGWKKFALD  1200
NFLEESDSCL FVPGGQENKR FVLDVSIFRV VPEVTPLSPN RRECFEVRLF DGASSCEKEA  1260
SHFVGKVQQQ NSDDDDDDSE ESEESLSKGF TDDTRQNVYY DCHNASRNRR RKNPGSRTPK  1320
SSSARSTDVS DDQNESDENA DEEDSITEEA RTTPKKAATT SSARKLPISA SRKRNRNGGS  1380
RGWRTFVRDN FLEEFDVCLF VPSIKKNGRY VLDVSIFRVV PEVVPSTLMA QVEVLLYPAG  1440
RFYWYKKLCK MNMKALLLAI FVVSLAFTFA KANVGFAVYH THHTPSACYQ NRDNGPWITG  1500
VSHALWNNRG ACGRNYRVTC IGGANLAPHP CKGGSVIVKV TDLCDSCAGD LNLSQEAFNA  1560
IADPKAGKIR IRYDPV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1734761KKRKSIGMILKRDKRRAFIEDDSISKDK
2743749LKRDKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.19e-19B3 family protein