PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003315-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 1577aa MW: 177368 Da PI: 8.4833

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003315-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.5	2.3e-13	564	643	17	99
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 lpkkf+ ++++ + + ++++ ++g W v+l ++ s+ ++lt + WkeFvka L+ +D ++Fk+d++ ++f v +f++ AUR62003315-RA 564 KLPKKFT-ANEI-ARLPENVIVKGPNGIIWHVNL-LSNDSNIVMLTgDVWKEFVKAYSLQKNDLLIFKYDRNdKSF--EVLFFDQ 643 69**8.6643.467789***********.56777777776488*******************977777..7777775 PP
2	B3	51.4	2e-16	837	932	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgr.sefelv 93 f+ v+ ps+v k+ l lp kf+ ++++ + + ++++ ++g W v+l+ ++ s++++lt + W+eFvka L+ +D ++Fk++++ ++f AUR62003315-RA 837 FIIVMRPSHVYKRFSLKLPEKFT-SNEIA-KLPENVIVKGPNGIIWHVNLQ-SNDSNHVMLTgDVWQEFVKAYSLQNNDLLTFKYNRTdKSF--E 926 78899***************9.77554.47779***********5.6666666666478******************9866666..8 PP EEEE-S CS B3 94 vkvfrk 99 v +f++ AUR62003315-RA 927 VLFFDQ 932 887775 PP
3	B3	42.3	1.3e-13	1132	1229	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sef 90 f+ v++ps v ++ lv+p + + + +k ++++l++ + ++Wev +++ +++g+ +++GWk+F+ +n L+e D+++F ++ ++f AUR62003315-RA 1132 FIVVMKPSQVYNNFALVIPQSWNYKGfSRDK--RQEVILRT-NDNTWEVSFCIINRRGHGAFRGGWKKFALDNFLEESDSCLFVPGgQEnKRF 1221 8899***************9644445444..44788776.889**9999999989*********************662445777 PP ..EEEEE- CS B3 91 elvvkvfr 98 l v++fr AUR62003315-RA 1222 VLDVSIFR 1229 77777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1577 aa Download sequence
MKEEEWKILD RQALGVIRLT LAKSVAYNVK DVTTTVGVIK ALTNMYEKPS AMNKVFLMRR 60 LFEIEMNDGG SAPEHINESN SIISQLASLK CDDVRDLILS ESLRRKNSGE SSGGAYSSKG 120 RGRGRQQRGA QKGRSKSRGR SKLKGKVNIV CWGCGVKGHT KRDCPNPKKK GGSNHKNHDD 180 ASSSVSLASS DELGDALILS VDSPIESWIL DSGASFHSSP CKEIFQNFKS GKFGKVYLAD 240 DEPLDIVGKG DFMIKTSSGS SWKLEDVRYI PKLRKNLISV GQLDSSGFRT MFGEGDEWKY 300 VELDGEVKSG KEVEQVEVEV QIQQTSPQHS AHVPVDSDSS DSDDDDHFET DERVVMGEPV 360 VVQGDISTPP TVRRSSRPIK PPNRYSPSLH YLFMSNLGER HWEAVKWLLR YLLGTSSMAL 420 CFGRNEVVLE GFVDADFGGC YDSSKSTSGY VYTIGGTTIS WMSKLQKCVS MSTTEAKYVA 480 MSEAGKEMEW LKGFLEEMSM KQDVCALYSD SQSAVQLAKN TMFHYRTKHI KRRYHYTRSL 540 VKDGTMCLRK IAGSKNPANM LTKKLPKKFT ANEIARLPEN VIVKGPNGII WHVNLLSNDS 600 NIVMLTGDVW KEFVKAYSLQ KNDLLIFKYD RNDKSFEVLF FDQTNSCERE SSYFVRKCEQ 660 PQSNSGSDEQ AKSDSFEYII CSSDSTAHTD RDLDEEQDED EPGESNKDRS TSKQQNSEKD 720 NESSPKEVPS NCLKKRKSIG MILKRDKRRA FIEDDSISKD KCSKVNGYSS KKTHSHSAAS 780 DSDKDGSDYV PLFENMKRKS STVVAAASYR SNRRPVTDAE KEKAVALASE NAIGESFIIV 840 MRPSHVYKRF SLKLPEKFTS NEIAKLPENV IVKGPNGIIW HVNLQSNDSN HVMLTGDVWQ 900 EFVKAYSLQN NDLLTFKYNR TDKSFEVLFF DQTNSCERES SYFVRKCEQP QSNGGFDEQA 960 KSDSFDKIIC SSDSTAHTDR DLDDERDEDE DENEPSRKSN KHKSTSKQPN SLKKNQSTPK 1020 EALSNHSRKR KFTRFDKGER DKRKAFIIED DSISKKNNSL KVNGSNLNKT RSHSAARVSN 1080 RNDVPIYVRM SRKSSTVVAA AASYISNRRP VTDEEKEKAY VLATKYATDE SFIVVMKPSQ 1140 VYNNFALVIP QSWNYKGFSR DKRQEVILRT NDNTWEVSFC IINRRGHGAF RGGWKKFALD 1200 NFLEESDSCL FVPGGQENKR FVLDVSIFRV VPEVTPLSPN RRECFEVRLF DGASSCEKEA 1260 SHFVGKVQQQ NSDDDDDDSE ESEESLSKGF TDDTRQNVYY DCHNASRNRR RKNPGSRTPK 1320 SSSARSTDVS DDQNESDENA DEEDSITEEA RTTPKKAATT SSARKLPISA SRKRNRNGGS 1380 RGWRTFVRDN FLEEFDVCLF VPSIKKNGRY VLDVSIFRVV PEVVPSTLMA QVEVLLYPAG 1440 RFYWYKKLCK MNMKALLLAI FVVSLAFTFA KANVGFAVYH THHTPSACYQ NRDNGPWITG 1500 VSHALWNNRG ACGRNYRVTC IGGANLAPHP CKGGSVIVKV TDLCDSCAGD LNLSQEAFNA 1560 IADPKAGKIR IRYDPV*

Sequence ? help Back to Top

Protein Sequence Length: 1577 aa Download sequence

MKEEEWKILD RQALGVIRLT LAKSVAYNVK DVTTTVGVIK ALTNMYEKPS AMNKVFLMRR  60
LFEIEMNDGG SAPEHINESN SIISQLASLK CDDVRDLILS ESLRRKNSGE SSGGAYSSKG  120
RGRGRQQRGA QKGRSKSRGR SKLKGKVNIV CWGCGVKGHT KRDCPNPKKK GGSNHKNHDD  180
ASSSVSLASS DELGDALILS VDSPIESWIL DSGASFHSSP CKEIFQNFKS GKFGKVYLAD  240
DEPLDIVGKG DFMIKTSSGS SWKLEDVRYI PKLRKNLISV GQLDSSGFRT MFGEGDEWKY  300
VELDGEVKSG KEVEQVEVEV QIQQTSPQHS AHVPVDSDSS DSDDDDHFET DERVVMGEPV  360
VVQGDISTPP TVRRSSRPIK PPNRYSPSLH YLFMSNLGER HWEAVKWLLR YLLGTSSMAL  420
CFGRNEVVLE GFVDADFGGC YDSSKSTSGY VYTIGGTTIS WMSKLQKCVS MSTTEAKYVA  480
MSEAGKEMEW LKGFLEEMSM KQDVCALYSD SQSAVQLAKN TMFHYRTKHI KRRYHYTRSL  540
VKDGTMCLRK IAGSKNPANM LTKKLPKKFT ANEIARLPEN VIVKGPNGII WHVNLLSNDS  600
NIVMLTGDVW KEFVKAYSLQ KNDLLIFKYD RNDKSFEVLF FDQTNSCERE SSYFVRKCEQ  660
PQSNSGSDEQ AKSDSFEYII CSSDSTAHTD RDLDEEQDED EPGESNKDRS TSKQQNSEKD  720
NESSPKEVPS NCLKKRKSIG MILKRDKRRA FIEDDSISKD KCSKVNGYSS KKTHSHSAAS  780
DSDKDGSDYV PLFENMKRKS STVVAAASYR SNRRPVTDAE KEKAVALASE NAIGESFIIV  840
MRPSHVYKRF SLKLPEKFTS NEIAKLPENV IVKGPNGIIW HVNLQSNDSN HVMLTGDVWQ  900
EFVKAYSLQN NDLLTFKYNR TDKSFEVLFF DQTNSCERES SYFVRKCEQP QSNGGFDEQA  960
KSDSFDKIIC SSDSTAHTDR DLDDERDEDE DENEPSRKSN KHKSTSKQPN SLKKNQSTPK  1020
EALSNHSRKR KFTRFDKGER DKRKAFIIED DSISKKNNSL KVNGSNLNKT RSHSAARVSN  1080
RNDVPIYVRM SRKSSTVVAA AASYISNRRP VTDEEKEKAY VLATKYATDE SFIVVMKPSQ  1140
VYNNFALVIP QSWNYKGFSR DKRQEVILRT NDNTWEVSFC IINRRGHGAF RGGWKKFALD  1200
NFLEESDSCL FVPGGQENKR FVLDVSIFRV VPEVTPLSPN RRECFEVRLF DGASSCEKEA  1260
SHFVGKVQQQ NSDDDDDDSE ESEESLSKGF TDDTRQNVYY DCHNASRNRR RKNPGSRTPK  1320
SSSARSTDVS DDQNESDENA DEEDSITEEA RTTPKKAATT SSARKLPISA SRKRNRNGGS  1380
RGWRTFVRDN FLEEFDVCLF VPSIKKNGRY VLDVSIFRVV PEVVPSTLMA QVEVLLYPAG  1440
RFYWYKKLCK MNMKALLLAI FVVSLAFTFA KANVGFAVYH THHTPSACYQ NRDNGPWITG  1500
VSHALWNNRG ACGRNYRVTC IGGANLAPHP CKGGSVIVKV TDLCDSCAGD LNLSQEAFNA  1560
IADPKAGKIR IRYDPV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	734	761	KKRKSIGMILKRDKRRAFIEDDSISKDK
2	743	749	LKRDKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	9e-19	B3 family protein