PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62003249-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 371aa MW: 43013.2 Da PI: 10.3733 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.2 | 4.7e-16 | 81 | 171 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ps v k+ + +pk+fa+++ ++k + + t l+ +++W v + ++ ++ ++kGWk+ + +n+Lk+gD+++F+l++++ f v+++r AUR62003249-RA 81 IQPSFVVKNFSMGIPKEFAKRYlDKKRPFNLTFNLQIDASKTWPVLV--DGDYTHVKFRKGWKDIALENKLKVGDICIFELIKKHLF--QVHIIR 171 56788999**************866666777888888899*******..********************************997777..777765 PP | |||||||
2 | B3 | 50.7 | 3.2e-16 | 259 | 353 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f++++ ps + + ++ +pk+f ++ ++k++ s l++ sg++W v++ + + l++GWk F+ +n+L++ D+++F+l++++ef +v AUR62003249-RA 259 FVTKMQPSFIGYNYCVGVPKTFRMRYlDKKERFSHRFNLRTNSGKTWPVTI--VASNTHARLKTGWKTFALDNKLNVDDTCIFELINQQEF--KV 349 67788888888888899*****99999999999******************..66666678************************987777..88 PP EEE- CS B3 95 kvfr 98 +++r AUR62003249-RA 350 SILR 353 8887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MSACEIEYPI HSEACREIPP MMKKIIDITN KSSSLEKVKA MRTNVDAKLI IARDTSLTSK 60 EDKKVRAYAQ QRKQPLFVIR IQPSFVVKNF SMGIPKEFAK RYLDKKRPFN LTFNLQIDAS 120 KTWPVLVDGD YTHVKFRKGW KDIALENKLK VGDICIFELI KKHLFQVHII RVFYEKIAEN 180 LVFKTEEESN YPLTTKACRE SPPKKRKTNE NTKPCSSVKG MQTSMDDKLT IANKRNCKLT 240 PEEYKRIRAY AHQCKHPVFV TKMQPSFIGY NYCVGVPKTF RMRYLDKKER FSHRFNLRTN 300 SGKTWPVTIV ASNTHARLKT GWKTFALDNK LNVDDTCIFE LINQQEFKVS ILRVANAKGN 360 RENPAVKCEV * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 2e-13 | B3 family protein |