PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003249-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 371aa    MW: 43013.2 Da    PI: 10.3733
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003249-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.24.7e-1681171598
                     -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       ps v k+  + +pk+fa+++ ++k + + t  l+   +++W v +  ++   ++ ++kGWk+ + +n+Lk+gD+++F+l++++ f   v+++r
  AUR62003249-RA  81 IQPSFVVKNFSMGIPKEFAKRYlDKKRPFNLTFNLQIDASKTWPVLV--DGDYTHVKFRKGWKDIALENKLKVGDICIFELIKKHLF--QVHIIR 171
                     56788999**************866666777888888899*******..********************************997777..777765 PP

2B350.73.2e-16259353198
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     f++++ ps  + + ++ +pk+f  ++ ++k++ s    l++ sg++W v++    +  +  l++GWk F+ +n+L++ D+++F+l++++ef  +v
  AUR62003249-RA 259 FVTKMQPSFIGYNYCVGVPKTFRMRYlDKKERFSHRFNLRTNSGKTWPVTI--VASNTHARLKTGWKTFALDNKLNVDDTCIFELINQQEF--KV 349
                     67788888888888899*****99999999999******************..66666678************************987777..88 PP

                     EEE- CS
              B3  95 kvfr 98 
                     +++r
  AUR62003249-RA 350 SILR 353
                     8887 PP

Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MSACEIEYPI HSEACREIPP MMKKIIDITN KSSSLEKVKA MRTNVDAKLI IARDTSLTSK  60
EDKKVRAYAQ QRKQPLFVIR IQPSFVVKNF SMGIPKEFAK RYLDKKRPFN LTFNLQIDAS  120
KTWPVLVDGD YTHVKFRKGW KDIALENKLK VGDICIFELI KKHLFQVHII RVFYEKIAEN  180
LVFKTEEESN YPLTTKACRE SPPKKRKTNE NTKPCSSVKG MQTSMDDKLT IANKRNCKLT  240
PEEYKRIRAY AHQCKHPVFV TKMQPSFIGY NYCVGVPKTF RMRYLDKKER FSHRFNLRTN  300
SGKTWPVTIV ASNTHARLKT GWKTFALDNK LNVDDTCIFE LINQQEFKVS ILRVANAKGN  360
RENPAVKCEV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.12e-13B3 family protein