PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62003248-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 204aa MW: 22954.4 Da PI: 9.2982 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.4 | 3.9e-16 | 99 | 196 | 5 | 100 |
-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 5 ltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy.rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ++ ++l+++++ +p + +++h gg+ ++++l+ + ++W+vk+++ r +sg+ + l+kG + F +n ++ gD++vF+l+++ +l+v AUR62003248-RA 99 KITTSYLTHNLVNIPVQWVNAHmeGGD---VREIKLQGpPPRKTWTVKMTVyRPSSGSnCKLSKGLSAFFLDNYVQLGDICVFELVKNAPNTLKV 190 45678888999***********86444...247999997888*******6559999989*****************************9999*** PP EEE-SS CS B3 95 kvfrks 100 ++frk+ AUR62003248-RA 191 TIFRKN 196 ***985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MGWKEFVKEN DLKVGEFMVF TYLGNSNFSV KLYGTHGCLK ETVQEGEAPA EIELMYKRGK 60 QTRRPGAGRP PSYDPDEELV RVAQAYRSAH SDIPSFMVKI TTSYLTHNLV NIPVQWVNAH 120 MEGGDVREIK LQGPPPRKTW TVKMTVYRPS SGSNCKLSKG LSAFFLDNYV QLGDICVFEL 180 VKNAPNTLKV TIFRKNDVLV FQS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31640.1 | 1e-12 | B3 family protein |