PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62003245-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 330aa MW: 38681.4 Da PI: 9.4981 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 63.6 | 3.2e-20 | 82 | 171 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk++ +++ l++p+kf +e+ +k s+ +tl+ +sg sW+ l ++++ + l++GW++Fvk++ L+egDf+vF+++++s f +v AUR62003245-RA 82 FFKIM--LGDFEN-YLRIPRKFKDEYREK--LSQRVTLRGPSGDSWTAAL--AQRGEDIELRNGWRDFVKDHSLEEGDFLVFQHVESSLF--NVL 167 55666..555555.5********999755..8889***************..99999999***********************9987777..999 PP EE-S CS B3 96 vfrk 99 +f+k AUR62003245-RA 168 IFDK 171 9997 PP | |||||||
2 | B3 | 46 | 9.8e-15 | 235 | 305 | 16 | 90 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 ++p++fa+++ + es++++l+ ++ W+v l +++ +++l kGW +Fv +n+L++ D +v++l ++ +++ AUR62003245-RA 235 HTIPREFADNCL-P-MESQEIKLRV-GSKIWRVSL--NRRNVQCTLNKGWAHFVLDNNLETEDYCVLELADTgTSQ 305 49******8884.2.3566899877.78*******..999999*************************88654444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MKIEKIVNLK EFLWIAYELK IGFNGILWVN DSVIVQEEKS VLSSWLQRFR VFVTEMTDVC 60 AQCKTWRKKQ YWNEFPDNKH HFFKIMLGDF ENYLRIPRKF KDEYREKLSQ RVTLRGPSGD 120 SWTAALAQRG EDIELRNGWR DFVKDHSLEE GDFLVFQHVE SSLFNVLIFD KTGCEREDSH 180 FVIQGKGTKS RTGKGKCYES NRRPLTKKDK ERAFRLASKH STTRPSCKIR MKQSHTIPRE 240 FADNCLPMES QEIKLRVGSK IWRVSLNRRN VQCTLNKGWA HFVLDNNLET EDYCVLELAD 300 TGTSQQPLTL DVHIYRAVEK IVPLKVILP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 3e-34 | B3 family protein |