PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002923-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 303aa    MW: 33032.9 Da    PI: 6.2714
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002923-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH451.9e-14110156354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  AUR62002923-RA 110 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 156
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MQQYHQATTS HSDPFGGNFV GGGGRAGMVF PDLTPPPPIP SQQQHHLLPW ELPQFAYEGS  60
SSDHHHLRLL SDALGPMVHQ PGSAPFGLQA ELNKMTAQEI MDAKALAASK SHSEAERRRR  120
ERINNHLAKL RSLLPSTTKT DKASLLAEVI QHVKELRRQT SIIAETSVVP TESDELTVDP  180
ASDEQDGKFI IKASLCCDDR TDLLPDLIKA LKTLRLRTLK AEITTLGGRV KNVLFVTHEP  240
NISDHDNNDN NQDDHDEDGP PGQCSISSIQ EALKAVMEKS GGGDESTSGN PKRQRTANIT  300
IS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116121ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-77bHLH family protein