PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62002338-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 221aa MW: 26116.7 Da PI: 8.0545 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.2 | 1.2e-12 | 10 | 53 | 42 | 87 |
TS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 42 sgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 s++ W vk+ + ++++ +++GW+ F+k++gL+egDf+vF+++++ AUR62002338-RA 10 SNNYWFVKV--CYYDEKLHFKDGWETFCKDHGLEEGDFLVFQHHRN 53 6688*****..88888899***********************7664 PP | |||||||
2 | B3 | 62.1 | 9.3e-20 | 129 | 217 | 3 | 93 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ++++s+ l+ g + lp++fa+e+++++++ +++l+de+g++W+v l+ +k++ +++ W++F +++gLk+gD vvF+l++ s+++++ AUR62002338-RA 129 ETFVKSYCLTWGGMPLPNEFARENDLVNKSCDEMVLKDEEGKEWTVSLRSYRKGRVAYIG-KWRNFHNEHGLKTGDPVVFELIE-SGETPK 217 678999******************99999999****************776666666666.7********************98.444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MLRNQRVKSS NNYWFVKVCY YDEKLHFKDG WETFCKDHGL EEGDFLVFQH HRNLIFDVFV 60 FDPTCCERPF PADFHQPSTN KVKSSSLNNL KIKDLFKNEK VEGLKLNKND KVYSTSKATF 120 KPREFPYCET FVKSYCLTWG GMPLPNEFAR ENDLVNKSCD EMVLKDEEGK EWTVSLRSYR 180 KGRVAYIGKW RNFHNEHGLK TGDPVVFELI ESGETPKMNF Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31680.1 | 2e-23 | B3 family protein |