PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62002318-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 1822aa MW: 206427 Da PI: 6.2539

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62002318-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.8	4.1e-18	141	232	6	92
..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS B3 6 tpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 p d++k++ l +pk fae++ +++ +s l++ed++g+ W+++++y+++ + y l++GW+ Fv+ ++L +gD+v F++ g + ++ AUR62002318-RA 141 APRDNGKLKFLAVPKVFAEKYfpkLLSSVTSLLLKFEDLTGKLWTFQYSYSNTYQCYALAEGWSLFVEKKQLSVGDTVFFYRGvGGeAKYKF 232 467889999************9455558889**********************************************54232233333 PP

Sequence ? help Back to Top
Protein Sequence Length: 1822 aa Download sequence
MSSSLSWEPQ LAGTTSVSDK PQDLNVADPF AHATMSSILN KPPQELNAAD PIAHATMSSV 60 SNKLQELNVA DPVAQIAISL CEALAAAKEL MANLKLSGSE SDLAASEFTK QVIFFVKRAQ 120 NLLPVKMEMM FHKVLLPMDV APRDNGKLKF LAVPKVFAEK YFPKLLSSVT SLLLKFEDLT 180 GKLWTFQYSY SNTYQCYALA EGWSLFVEKK QLSVGDTVFF YRGVGGEAKY KFFIHWNRRV 240 DAAKQSLGNA LHLDQTLVQP AFPSDMIADD ASAPFTKYSK GTPFSLVPPP SQNLNIPRNP 300 SFDVMVVDDA PPLFTPTIQS RCSPLNDSCD EMVVDCALAP FCPSLSLSPG PSLEKSFVGM 360 TADDALCYCA LFPHNYEFEK DMVVQLWIAH GVFVKEPMER IAGLFFEDCL SRGYFLFCRT 420 NLVTGKAMYK FKRDGSVVPL LISSCSRIVL IEGNSNLDDV SEDVSHVSIR CYRQKNYTII 480 QELKRFKHLR TLMFLHGREL SFKQVPRDIF LSLRLLQVLD LSQTHLLELP SSIGNMKCLR 540 YLDLSETLIK RLPEAIDCLE KLQTLKLRGC LNLSFLPKGM RKLVNLRHLD LDVCRQLRSM 600 PPGLGTLIHI QTLSAFLVDL EEECSIRQLQ NMNNLSGSFC ISRLENVLTK DEAMEACLYN 660 KSHLTKLELQ WSDAQDEDVS VNGEILSSLK PNTSLEELQI SCFDGFHLPS WICDSAFSKL 720 VGITLFKCEN CLVLPSLGQL PSLKFLNIVD FYKLKVIDHN FYGGLGIQGF IAFGKLEKLA 780 MENMLSLEKW TGMEKYVFPC LLTLTIKNCP KLSSLHTLSN LCFLKNLEIS HCDMLASWTD 840 GRLPASVETL IIEDCPMISV ESLKNGGQDW HKVAHIQNLR VDNQEIPSVV VTLLSTNLKT 900 LMEVFQSDFA LALLQDLLER FKFLIFEEAG QVVQFDAEDE LKKLKRKLLK AETLFDSFQL 960 TPNNTWHHWV GEVTGVCYDA EDLVDDIVLG ASKISVIEKI FSFFERRKMA QQIQDLQERL 1020 EDIISGLDMV NRTNKQALQC SLGCFKETAY TREQLRFPVR LFGRESDKEK IVSMLLEETL 1080 ITISIVGMDG LGKTTLAQSI QDDSRIQDKF HRIVWISVSA EFDMTKITDF ILNRRQEGEY 1140 SFHPERIQSS FGDLYLGKSI LFVLDDLREV KGNDWCSFCH YFLCSSGSKA LLTTSNPNVT 1200 SITNATPYHL QMMKDEDCQA LIMDRALSFN NISERKLVIL EDIAGAMAQK CKGLPLAANI 1260 LGLLLSSKHD DEDWVTLSER DICELSVFKE EIFPAFRLNN PYLASHLKKC LAYCSLFPRD 1320 YDFEKDNLVQ LWMAEGFLLP QGMTNLEQIG CEYFDELLRR SVFQLSHLGG QEMPSYKIHE 1380 FIHRFAEFVA SDTCFRLPNG EWSCSAPLYK KVRHLSLLCD CIKLRFLKEI EKCDGLRTFL 1440 LLSEHGTQIG QVPYSFFQKL VRLRVLDLSH TNIDELPESL GRLKHLRYLD ASQTHILRLP 1500 NSASDLHGLQ VLKLRGCSRL LELPKQIKNL TNLIHLDVDI KVLRCMPASI GSLSCLKTLP 1560 AFMVGKKEGY RITELKNLKH LGGTICLGKL EYVRDGAEAR EVMICDKPFI KRMELEWSRC 1620 SRDGSVAMDI LSGLQPHKNL KELLLINYGG SRFPVWLTSP SCLLVSIHVQ FCKQDDVLPS 1680 LGQLLFLKTL YIEGMDRVKC VDNHFCGEGR NGAFPSLESL KIQDMMCLTR WFKLPDNSMP 1740 QLRELTIEDC PNLLSMQSLK HMNSLQTFEL NHCMELMSLP ELPVSIQSLI IIDCDMVKQR 1800 CQSEEGPDWS SIRAIPYVEI D*

Sequence ? help Back to Top

Protein Sequence Length: 1822 aa Download sequence

MSSSLSWEPQ LAGTTSVSDK PQDLNVADPF AHATMSSILN KPPQELNAAD PIAHATMSSV  60
SNKLQELNVA DPVAQIAISL CEALAAAKEL MANLKLSGSE SDLAASEFTK QVIFFVKRAQ  120
NLLPVKMEMM FHKVLLPMDV APRDNGKLKF LAVPKVFAEK YFPKLLSSVT SLLLKFEDLT  180
GKLWTFQYSY SNTYQCYALA EGWSLFVEKK QLSVGDTVFF YRGVGGEAKY KFFIHWNRRV  240
DAAKQSLGNA LHLDQTLVQP AFPSDMIADD ASAPFTKYSK GTPFSLVPPP SQNLNIPRNP  300
SFDVMVVDDA PPLFTPTIQS RCSPLNDSCD EMVVDCALAP FCPSLSLSPG PSLEKSFVGM  360
TADDALCYCA LFPHNYEFEK DMVVQLWIAH GVFVKEPMER IAGLFFEDCL SRGYFLFCRT  420
NLVTGKAMYK FKRDGSVVPL LISSCSRIVL IEGNSNLDDV SEDVSHVSIR CYRQKNYTII  480
QELKRFKHLR TLMFLHGREL SFKQVPRDIF LSLRLLQVLD LSQTHLLELP SSIGNMKCLR  540
YLDLSETLIK RLPEAIDCLE KLQTLKLRGC LNLSFLPKGM RKLVNLRHLD LDVCRQLRSM  600
PPGLGTLIHI QTLSAFLVDL EEECSIRQLQ NMNNLSGSFC ISRLENVLTK DEAMEACLYN  660
KSHLTKLELQ WSDAQDEDVS VNGEILSSLK PNTSLEELQI SCFDGFHLPS WICDSAFSKL  720
VGITLFKCEN CLVLPSLGQL PSLKFLNIVD FYKLKVIDHN FYGGLGIQGF IAFGKLEKLA  780
MENMLSLEKW TGMEKYVFPC LLTLTIKNCP KLSSLHTLSN LCFLKNLEIS HCDMLASWTD  840
GRLPASVETL IIEDCPMISV ESLKNGGQDW HKVAHIQNLR VDNQEIPSVV VTLLSTNLKT  900
LMEVFQSDFA LALLQDLLER FKFLIFEEAG QVVQFDAEDE LKKLKRKLLK AETLFDSFQL  960
TPNNTWHHWV GEVTGVCYDA EDLVDDIVLG ASKISVIEKI FSFFERRKMA QQIQDLQERL  1020
EDIISGLDMV NRTNKQALQC SLGCFKETAY TREQLRFPVR LFGRESDKEK IVSMLLEETL  1080
ITISIVGMDG LGKTTLAQSI QDDSRIQDKF HRIVWISVSA EFDMTKITDF ILNRRQEGEY  1140
SFHPERIQSS FGDLYLGKSI LFVLDDLREV KGNDWCSFCH YFLCSSGSKA LLTTSNPNVT  1200
SITNATPYHL QMMKDEDCQA LIMDRALSFN NISERKLVIL EDIAGAMAQK CKGLPLAANI  1260
LGLLLSSKHD DEDWVTLSER DICELSVFKE EIFPAFRLNN PYLASHLKKC LAYCSLFPRD  1320
YDFEKDNLVQ LWMAEGFLLP QGMTNLEQIG CEYFDELLRR SVFQLSHLGG QEMPSYKIHE  1380
FIHRFAEFVA SDTCFRLPNG EWSCSAPLYK KVRHLSLLCD CIKLRFLKEI EKCDGLRTFL  1440
LLSEHGTQIG QVPYSFFQKL VRLRVLDLSH TNIDELPESL GRLKHLRYLD ASQTHILRLP  1500
NSASDLHGLQ VLKLRGCSRL LELPKQIKNL TNLIHLDVDI KVLRCMPASI GSLSCLKTLP  1560
AFMVGKKEGY RITELKNLKH LGGTICLGKL EYVRDGAEAR EVMICDKPFI KRMELEWSRC  1620
SRDGSVAMDI LSGLQPHKNL KELLLINYGG SRFPVWLTSP SCLLVSIHVQ FCKQDDVLPS  1680
LGQLLFLKTL YIEGMDRVKC VDNHFCGEGR NGAFPSLESL KIQDMMCLTR WFKLPDNSMP  1740
QLRELTIEDC PNLLSMQSLK HMNSLQTFEL NHCMELMSLP ELPVSIQSLI IIDCDMVKQR  1800
CQSEEGPDWS SIRAIPYVEI D*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	941	948	LKKLKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01030.1	2e-24	B3 family protein