PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002136-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 236aa    MW: 26617.4 Da    PI: 4.0016
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002136-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.51.2e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ l+  ++ +G  +W++ ++  g+ R++k+c++rw +yl
   AUR62002136-RA 14 KGPWTPEEDQTLISFIQHHGHSNWRALPKQAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGRAPCCDKV GLKKGPWTPE EDQTLISFIQ HHGHSNWRAL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGNF STEEEDTIIQ LHEMLGNSFP ESTSDHIATS GSPQQSSLTS DDMSSSGTEV  120
SSIEVPSDTS FIMDVQTFDN CIQQLPNLDY LPIIDETFWE PQDLLPSEFD NIMEDNDQMV  180
QFESFFCDEE QNNKFSAQVY DNNVGPVNYG DAKDNMDFWL DVFVQAGGAP ELPEF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.12e-54MYB family protein