PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002114-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 158aa    MW: 17879.7 Da    PI: 8.835
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002114-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.82e-211768256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdp+++g  +r++lg+f+tae Aa+a+++a+ kl+g+
  AUR62002114-RA 17 RYRGVRRRP-WGKFAAEIRDPTKQG--QRVWLGTFDTAEAAARAYDQAAFKLRGH 68
                    6********.**********98865..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MEGSSRGKQQ EGGDDVRYRG VRRRPWGKFA AEIRDPTKQG QRVWLGTFDT AEAAARAYDQ  60
AAFKLRGHLA TLNFPNEYYS KLDPIPHLPN VPRYFGTNRP SDSTISAVNN GWRVDRGGGS  120
SMGNTSVQPR QERQVIEFEY LDNKVLEDML RRSEEDD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-27ERF family protein