PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62002094-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

GRF

Protein Properties

Length: 332aa MW: 36643.6 Da PI: 8.7627

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62002094-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.2	6.9e-24	84	128	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++++++k+CErH++rgrsrsrk++e+ AUR62002094-RA 84 DPEPGRCRRTDGKKWRCAKEAYPDSKYCERHMNRGRSRSRKHVES 128 79****************************************986 PP
2	QLQ	60.3	5.5e-21	10	46	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l+yKyL+a++ vPp+L+++iq+ AUR62002094-RA 10 SPFTVSQWQELEHQALIYKYLIAGLSVPPDLVLPIQN 46 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MNRGGSEGVS PFTVSQWQEL EHQALIYKYL IAGLSVPPDL VLPIQNSFGT SSSAFFHRPT 60 LGYCGRENSL YGIGIGIGYG KKIDPEPGRC RRTDGKKWRC AKEAYPDSKY CERHMNRGRS 120 RSRKHVESNP FSSSSSTTTS VSVLNQSLPL KFNAFASASN AAAPTSNPNQ SQFQLDSIPY 180 AIPTKQYSRH LQGSKPEAGD NRSFSQCSGG NRSLIMDSAL DNTWPSLSPQ MSSLSQSKPM 240 DNSSLHDDYS HRSFINCEFG QPQSVKQGNR SLHPFFEEWP NTREAWSGLE DERANQVSFS 300 TTQLSISVPM TTTDFSASPR SPQGEVTLFI K*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-38	GRF family protein