PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002024-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 281aa    MW: 31740.7 Da    PI: 7.2507
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002024-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-2096146256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f taeeAa a+++a+ kl+ge
  AUR62002024-RA  96 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFETAEEAALAYDNAAYKLRGE 146
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MATALDFYNN TTNKPLLLDP LKEEQIKLQT PLNSSLFYSS YPLNNNIYLF NQEFTQMGIP  60
QNPSIQLPPP SSSNYRANHL LSPKPTLMKQ NKPTKLYRGV RQRHWGKWVA EIRLPKNRTR  120
LWLGTFETAE EAALAYDNAA YKLRGEFARL NFPHIKHHGA HVTTQFGHYK PLHSTVNAKL  180
EAICQSLDIS LKQGKTEEPC FSPVYSSVSY QIEENASSSS SQVLVPKAEV LPVVSDDSSA  240
NSCSPESGVT FIDFTESSWD EFNSFSLNKF PSFEIDWTNI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.18e-64ERF family protein