PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62001936-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 27925.3 Da PI: 4.8258 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.5 | 1.9e-19 | 111 | 160 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W++eIrdp + r +lg+f taeeAa+a+++a+ +++g AUR62001936-RA 111 KYRGVRQRP-WGKWASEIRDP-----HraVRMWLGTFETAEEAARAYDRAAVRFRG 160 8********.**********7.....338************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MDSTQNYYFY DEKPDIWHSE SNHEMNMMVS ALNQVISGGG SGIDQQPPSD GSHLIFESFQ 60 DQQNFATWSP ASSTTSPVLP PNSQIENADT TTSSSSSNSG KQRTRKYNRN KYRGVRQRPW 120 GKWASEIRDP HRAVRMWLGT FETAEEAARA YDRAAVRFRG PRAKLNFSVS DYLPQLEEYS 180 SNNIFYQNQE QQTNNNNNHV SPTNQEPETS GFVQITDGAE LEHWMNDMID NTPPCLMYGE 240 QSFGI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 7e-19 | ERF family protein |