PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62001898-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 95aa MW: 10828.5 Da PI: 10.836 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.1 | 4.6e-18 | 15 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykG+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g AUR62001898-RA 15 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVYYLRG 64 6******99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MEAGSTKKRE RAEKPYKGIR MRKWGKWVAE IREPNKRSRI WLGSYSTPVA AARAYDTAVY 60 YLRGPSARLN FPELLMGECR LSDLSAASIR KKSY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67190.1 | 1e-45 | ERF family protein |