PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001765-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 691aa    MW: 77891.6 Da    PI: 5.0483
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001765-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.51.8e-1123176881374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+avss dl+ a++lL+++++ +sp+gd++qR+a++++++L+arla+++s+++  +   + s   ss+ l++++l++ + P+ ++s+
  AUR62001765-RA 317 LRNLLVQCAQAVSSFDLRSANELLKQIRQYSSPYGDSIQRVAHHVANGLEARLAGTGSTISTDICDMKIS---SSDFLKSYRLYVSAIPFKRMSY 408
                     689****************************************************999999888777776...8********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN++I + +e+++++HiiDf+i  GlQWp+++qaL++Rp+gpp+lRiTg++ p++g   +e++++tg+rL+ ++e++gvpf+++  +a+++e+
  AUR62001765-RA 409 FLANNTIKKLTEKATKIHIIDFGIFLGLQWPCFIQALSQRPDGPPELRITGIDFPQQGfrPAERVNATGRRLSGYCERFGVPFKYQG-IAEKWEN 502
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+++++E+++Vn++++  +llde+v+ +s++d++L+l+++++P+++++   +   +++ F +rf eal +ysa f+ ++a+lpr+++er 
  AUR62001765-RA 503 IKLEDLKIESDEMVIVNCMFRSGTLLDETVEPNSPKDAFLRLIRNMNPDLFIHGIVNGTFTAPFFINRFKEALFHYSAAFEVFDATLPRDAHERL 597
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E e+ g+eivnvvacegaer++r et++kW+er  +aG+++vpl+ + +++ k++++  + + + v+e+++++++gWk+r   ++S+W+
  AUR62001765-RA 598 LIESEMYGKEIVNVVACEGAERVQRPETYKKWQERALRAGLQQVPLDREFVSKTKAMVKANYLKDFLVDEDRQWMLQGWKGRIFCALSFWK 688
                     **************************************************************777*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
MNSVLVDSDL MNSAFKFYPA EMGSNYLKNP TFGDFFQTPE FVEPQTLEFE ENESKISLEA  60
PDSINLDTLS IDQNESNSSC LKIPDFPDHC LKFISDILLE EDLDENPASA QEHWALQATE  120
KSLYDALGES YPFQNQYPPS SHYSPSTSDP NTISVDDSSS GKSFSSFESN LTYLSHSQPQ  180
LDLNVDDFVQ SFLELNPQSS GSSSEDGDDG VVNDVVVPKK PLSTAPKKGE KPVKGLRRKK  240
SRQRDDVDHE GGRCNKLQAS SSEDYAELEQ YDDVLLCSEN KMHASLSPKE CLSTTKGHGS  300
RGARGKKQSI KVDEVDLRNL LVQCAQAVSS FDLRSANELL KQIRQYSSPY GDSIQRVAHH  360
VANGLEARLA GTGSTISTDI CDMKISSSDF LKSYRLYVSA IPFKRMSYFL ANNTIKKLTE  420
KATKIHIIDF GIFLGLQWPC FIQALSQRPD GPPELRITGI DFPQQGFRPA ERVNATGRRL  480
SGYCERFGVP FKYQGIAEKW ENIKLEDLKI ESDEMVIVNC MFRSGTLLDE TVEPNSPKDA  540
FLRLIRNMNP DLFIHGIVNG TFTAPFFINR FKEALFHYSA AFEVFDATLP RDAHERLLIE  600
SEMYGKEIVN VVACEGAERV QRPETYKKWQ ERALRAGLQQ VPLDREFVSK TKAMVKANYL  660
KDFLVDEDRQ WMLQGWKGRI FCALSFWKPS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-158GRAS family protein