PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001763-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 726aa    MW: 82354 Da    PI: 4.9473
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001763-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS348.79.2e-1073557232374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     + lL++cA++v++ +l+ a  +L++++e++sp+gd +qR+a+y++++L+arl +++ el +a +  +      se+l+a ++++   P+  +s+ 
  AUR62001763-RA 355 RGLLTRCAQCVAQVSLSGAYDMLKQIREHSSPYGDFLQRVAHYLANGLEARLEGKGLELTHANEEIS-----PSEVLKANRIYVASVPFQIMSYY 444
                     679***************************************************6666665443333.....5799******************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     t N++I + ve++  +HiiDf+i +GlQWp+++q L++Rp+gpp++RiTg++ p+ g   +e++eetg+ Lak++e+ +vpfe+ + +ak++ed+
  AUR62001763-RA 445 TMNKTIARLVEEAPSIHIIDFGIYYGLQWPCIIQNLSKRPNGPPKIRITGIDFPQRGfrPAERVEETGRCLAKYCEKYNVPFEYYP-IAKKWEDV 538
                     *******************************************************99*****************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +leeL+++++E l+Vn+ ++ h l+desv+ +s+rd++Lklv++++P++++++  ++  + + Fl+rf e + +ysalfd +e+++++e++er  
  AUR62001763-RA 539 QLEELKIERNEPLVVNCLYRAHLLFDESVEENSPRDAFLKLVRKINPDIFIHAVVNSTSSVPFFLNRFKEVMFHYSALFDIFESTMSKEDNERLL 633
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E +l g+++ n++aceg er+er e++++W+ r ++aGF++v l+ +    a++++++  s++++ + + +++v+gWk+r L+++S+W+
  AUR62001763-RA 634 LESKLYGPQALNIIACEGIERVERPESYKQWQVRTQRAGFEQVGLDRELLRRARAMVKRSFSEEFSYDVDGNWVVQGWKGRILYAISCWK 723
                     ***********************************************************99999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 726 aa     Download sequence    
MNLYGFNPEI SYPFLGDEEN AEPSFPSYNH QFGNNIANNS NNNISDQFHE HTFFDECQIH  60
VPNNLGNLLP NDPTEIPAIP DTCFNYINDL LREEYCSPDD NFHTPNSTLE DYMAAQLSYN  120
KSLDAALHLG ENFSISFSAN HDYMHNQCPP PDICQTSPHC LDDYLDMFSS NNNINIPFSY  180
APNFGNNDNF GSTFVRSSPM NESISHGAGL NPAPGDLIGG GGGESIHFYE VGFGFIINDN  240
NYLFQDQVSG HNVSTVENLE APICEKGDQS YTDSTRRRKH DIEENGDQRK NKNIAPCNDE  300
VIEQIEQYGD VILCPEGRSK PGALCNSSSR TQNSGDSSKG SKKRGNNKVQ APDLRGLLTR  360
CAQCVAQVSL SGAYDMLKQI REHSSPYGDF LQRVAHYLAN GLEARLEGKG LELTHANEEI  420
SPSEVLKANR IYVASVPFQI MSYYTMNKTI ARLVEEAPSI HIIDFGIYYG LQWPCIIQNL  480
SKRPNGPPKI RITGIDFPQR GFRPAERVEE TGRCLAKYCE KYNVPFEYYP IAKKWEDVQL  540
EELKIERNEP LVVNCLYRAH LLFDESVEEN SPRDAFLKLV RKINPDIFIH AVVNSTSSVP  600
FFLNRFKEVM FHYSALFDIF ESTMSKEDNE RLLLESKLYG PQALNIIACE GIERVERPES  660
YKQWQVRTQR AGFEQVGLDR ELLRRARAMV KRSFSEEFSY DVDGNWVVQG WKGRILYAIS  720
CWKPT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46600.21e-139GRAS family protein