PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001537-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

E2F/DP

Protein Properties

Length: 486aa MW: 54055.4 Da PI: 4.578

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001537-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.5	2e-27	138	203	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg AUR62001537-RA 138 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 203 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MSTPKATNHQ SQQQQPQPLK RQLPFTSMKP PFVPPPGDYH RFSDNRAPLP PDTETIVVKT 60 PPMKRKSDTA EYDAESSDWT TSPGYTDVVS SPLQTPVSGK AGKGRGSRIS KCNRAGPQTP 120 MSNIGSPGNN LTPVGPCRYD SSLGLLTKKF INLIKHAEDG ILDLNKAADT LEVQKRRIYD 180 ITNVLEGIGL IEKKLKNRIQ WKGLDVSRPG EVDDSVTSLQ ADVENLSMEE RRLDEQIREM 240 QERLREMSED ENNQKWLFVT EEDIKGLPCF QSETLIAIKA PHGTTLEVPD PDEASSGAVD 300 YQQRRYRIVL RSTMGPIDVY LVSQFEEKFE EISGAEPQPS MPSTSGCDEG TTAAAKEESR 360 DDETEMQGQE THRICSDAND QQDFVSGIMK IVPEVDSDAD YWLLSDGDVS ITDMWRTDLI 420 AGVEWNDLGT IHEDYAVANV GTPQPQSPPP SATEVLPNNM TGSLRIGYKM ASRMLLDHVQ 480 YCSVHK

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MSTPKATNHQ SQQQQPQPLK RQLPFTSMKP PFVPPPGDYH RFSDNRAPLP PDTETIVVKT  60
PPMKRKSDTA EYDAESSDWT TSPGYTDVVS SPLQTPVSGK AGKGRGSRIS KCNRAGPQTP  120
MSNIGSPGNN LTPVGPCRYD SSLGLLTKKF INLIKHAEDG ILDLNKAADT LEVQKRRIYD  180
ITNVLEGIGL IEKKLKNRIQ WKGLDVSRPG EVDDSVTSLQ ADVENLSMEE RRLDEQIREM  240
QERLREMSED ENNQKWLFVT EEDIKGLPCF QSETLIAIKA PHGTTLEVPD PDEASSGAVD  300
YQQRRYRIVL RSTMGPIDVY LVSQFEEKFE EISGAEPQPS MPSTSGCDEG TTAAAKEESR  360
DDETEMQGQE THRICSDAND QQDFVSGIMK IVPEVDSDAD YWLLSDGDVS ITDMWRTDLI  420
AGVEWNDLGT IHEDYAVANV GTPQPQSPPP SATEVLPNNM TGSLRIGYKM ASRMLLDHVQ  480
YCSVHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-151	E2F/DP family protein