PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001420-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 385aa    MW: 42560.9 Da    PI: 4.5042
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001420-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19116166256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++ge
  AUR62001420-RA 116 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRGE 166
                     69*******.**********954...4**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MCGGAVISDF IPAGRSHRLN SDYLWPELKK GVSGYSKPLR SETVNVVDED DDAIADQAFE  60
ADFLEFKDES DDDVSIIPDF KPFSFGLFKP KSSNGLKPVE FNSQAEKTAK RKRKNQYRGI  120
RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE EAARAYDAEA RRIRGEKAKV NFPEETPVSA  180
AAPRRTVKAR SQKPAAKTAS PTPQNMNQRF NIMNNAQNEY YNNFALVEEK PQVNHFEYSN  240
PMPALGEVAV NPFNSLSGGS DLFFNSDEGS NSFDCSDFNW GENGPKTPEI SSFFSAALES  300
DDSGNATKKM KSTSGDAVPV EENSGKSLSE ELSDVDLESQ LNFLETPYLD ENWAIEAFLG  360
GDASNGGVNP MELWSFDDFP GGVF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.15e-72ERF family protein