PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62000808-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 1014aa MW: 112426 Da PI: 8.2363

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62000808-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.6	1.4e-08	42	76	3	39
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 W++ E e++++a +++G + Wk++a+ + R+ + AUR62000808-RA 42 QWSKHEIERFYEAYRKHGQD-WKKVAAVVR-SRSIDM 76 6***************99.****999.998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1014 aa Download sequence
MAPVKKSKSV NRVITSASDS SPSKDEKSKQ KKRKLSDMLG PQWSKHEIER FYEAYRKHGQ 60 DWKKVAAVVR SRSIDMVEAL YNMNRAYLSL PEGTASVVGL IAMMTDHYNV LDGSGSEKEI 120 KGPEGMARKI QKNTKAKGLL DSSRDDSKLR SACSSDGCLS LLKNRGDGIQ LNFPVRKRTP 180 RVPVSCLDIH PNKKSRVLGK IANDNGVPYG DLRPKEAWCN PNSLHGSQTM YRKNECTRTS 240 QVSTREEVMS RSPVLKVRNG GFAADRDFKE CSLGYNEAKT ENWARDRHSE AMLFDNIREA 300 YKYADEGPRR IGSDGKSADI CRSTSEGQSK GKKLTFEDEL AACDALQTLA EMSSMMPYIA 360 AEPAEDAGDS VLVRETVVNR VACSNIALSD EKASVEFKKK RKSQALKVPK AEFPNDFSKK 420 PTEDESVADE DVKSGNSSGQ ISVVSKNCKS LVRSPDVSSS NDPHTGETEV AVSSAQVHHA 480 SQVVNPKRRQ KRDRTFLLKD KNYSPSCSSD SLSVPHDRLQ DVKGKLLHCL SWPEVRRWCV 540 YEWFYSAIDY PWFAKREFVE YLDHVGLGHI PRLTRFELGV IRSSLGKPRR FSERFLQEER 600 KKLNQYRESV RTQYANLRAG LGEGLPTDLA CPLYVGQKVV AIHPKTRECH NGSVLTVDRD 660 NCMVQFHHPD LGVELVMDID CMPLNLLENT PEDLKRQNML FDYRCVQVPK INGANFSALE 720 EYNKNVNHHI TVPSFSPSIA ADIKAKPACL SAYAKVVGSG SFQIPSATQN KSYNMAQLHL 780 QEGHMRFIPG LTGGLDQKVF GQSFSESLPS WPHPTTESVG LNGNMPCLNN SGISCQETAS 840 NVAEIVEGSK DKAQKMVDTA TKAISIMKEG EDAFGRISEA LDASCKSERA TSCRTSMIPS 900 SNAVRGSLAH QNPLTSCASE PPLSCDAFTE RPTDDSVSND LQIPYDLITS CVATLLMIQT 960 CTERQYPPAE VAQILDDAVT GLHPCCPQNL SIYREIQMCM GRIKTQILAL VPT*

Sequence ? help Back to Top

Protein Sequence Length: 1014 aa Download sequence

MAPVKKSKSV NRVITSASDS SPSKDEKSKQ KKRKLSDMLG PQWSKHEIER FYEAYRKHGQ  60
DWKKVAAVVR SRSIDMVEAL YNMNRAYLSL PEGTASVVGL IAMMTDHYNV LDGSGSEKEI  120
KGPEGMARKI QKNTKAKGLL DSSRDDSKLR SACSSDGCLS LLKNRGDGIQ LNFPVRKRTP  180
RVPVSCLDIH PNKKSRVLGK IANDNGVPYG DLRPKEAWCN PNSLHGSQTM YRKNECTRTS  240
QVSTREEVMS RSPVLKVRNG GFAADRDFKE CSLGYNEAKT ENWARDRHSE AMLFDNIREA  300
YKYADEGPRR IGSDGKSADI CRSTSEGQSK GKKLTFEDEL AACDALQTLA EMSSMMPYIA  360
AEPAEDAGDS VLVRETVVNR VACSNIALSD EKASVEFKKK RKSQALKVPK AEFPNDFSKK  420
PTEDESVADE DVKSGNSSGQ ISVVSKNCKS LVRSPDVSSS NDPHTGETEV AVSSAQVHHA  480
SQVVNPKRRQ KRDRTFLLKD KNYSPSCSSD SLSVPHDRLQ DVKGKLLHCL SWPEVRRWCV  540
YEWFYSAIDY PWFAKREFVE YLDHVGLGHI PRLTRFELGV IRSSLGKPRR FSERFLQEER  600
KKLNQYRESV RTQYANLRAG LGEGLPTDLA CPLYVGQKVV AIHPKTRECH NGSVLTVDRD  660
NCMVQFHHPD LGVELVMDID CMPLNLLENT PEDLKRQNML FDYRCVQVPK INGANFSALE  720
EYNKNVNHHI TVPSFSPSIA ADIKAKPACL SAYAKVVGSG SFQIPSATQN KSYNMAQLHL  780
QEGHMRFIPG LTGGLDQKVF GQSFSESLPS WPHPTTESVG LNGNMPCLNN SGISCQETAS  840
NVAEIVEGSK DKAQKMVDTA TKAISIMKEG EDAFGRISEA LDASCKSERA TSCRTSMIPS  900
SNAVRGSLAH QNPLTSCASE PPLSCDAFTE RPTDDSVSND LQIPYDLITS CVATLLMIQT  960
CTERQYPPAE VAQILDDAVT GLHPCCPQNL SIYREIQMCM GRIKTQILAL VPT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	486	492	PKRRQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-158	MYB_related family protein